RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 GGT2P36268 569 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 POLR2IP36954 125 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 ALDH3B2P48448 385 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 PSMD4P55036 377 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 CDH15P55291 814 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 SLC26A5P58743 744 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 IGLV3-21P80748 117 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 TEKQ02763 1124 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 COX10Q12887 443 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 FOXD4Q12950 439 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 CDK5R2Q13319 367 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 PIN1Q13526 163 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF267Q14586 743 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 EXOSC7Q15024 291 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 TRAM2Q15035 370 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF468Q5VIY5 522 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 AGAP7PQ5VUJ5 663 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 TYW3Q6IPR3 259 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 FRRS1Q6ZNA5 592 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 DGAT2L6Q6ZPD8 337 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 KCTD8Q6ZWB6 473 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 PLEKHM3Q6ZWE6 761 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 WDR53Q7Z5U6 358 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 VRK2Q86Y07 508 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 BEST3Q8N1M1 668 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 OR7G1Q8NGA0 311 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 OR9Q2Q8NGE9 314 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 OR6T1Q8NGN1 323 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 FAM81AQ8TBF8 368 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 IPCEF1Q8WWN9 437 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF566Q969W8 418 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 GTPBP3Q969Y2 492 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 ART5Q96L15 291 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 AGAP4Q96P64 663 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 SDF2Q99470 211 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 TSC22D3Q99576 134 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 NIPSNAP1Q9BPW8 284 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 TUBA1CQ9BQE3 449 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 LMF2Q9BU23 707 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 G6PC3Q9BUM1 346 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 POLR2J2Q9GZM3 115 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 YIPF3Q9GZM5 350 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 CCDC90BQ9GZT6 254 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF350Q9GZX5 532 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 QRSL1Q9H0R6 528 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 POLR2J3Q9H1A7 115 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 ANKRD19PQ9H560 264 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 FOLH1BQ9HBA9 442 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 PNO1Q9NRX1 252 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 PGPEP1Q9NXJ5 209 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF223Q9UK11 482 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 MRTO4Q9UKD2 239 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 A4GNTQ9UNA3 340 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 B3GNT3Q9Y2A9 372 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 NINQ8N4C6 2090 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 PTPN13Q12923 2485 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 IGKV3D-11A0A0A0MRZ8 115 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 TRBV4-1A0A0J9YWV2 114 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 A0A1W2PQ72 361 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 TCRBV16S1A1N1A0A5B0 115 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 SH3PXD2BA1X283 911 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 PTGES3LE9PB15 166 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 H3BN98 237 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 HRKO00198 91 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 CDK2AP1O14519 115 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 FFAR1O14842 300 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 KIAA0513O60268 411 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 FCMRO60667 390 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 LILRA1O75019 489 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 FAM20BO75063 409 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 CYP7B1O75881 506 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 OR5F1O95221 314 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 CBX7O95931 251 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 GASTP01350 101 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 SERPINA7P05543 415 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 CT62P0C5K7 136 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 VSIG8P0DPA2 414 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 NID1P14543 1247 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 POU2F1P14859 743 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 TRHRP34981 398 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-216ENST00000484087 IDH2P48735 452 aaKnown RBP6.35□□□□□ -1.39
BRCA1-216ENST00000484087 CRISP1P54107 249 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 SOX8P57073 446 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 ARG2P78540 354 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 MGAT2Q10469 447 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 MFAP5Q13361 173 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 MAD2L1BPQ15013 274 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-216ENST00000484087 EIF2S3LQ2VIR3 472 aaKnown RBP6.35□□□□□ -1.39
BRCA1-216ENST00000484087 ZBED5Q49AG3 693 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 FLYWCH1Q4VC44 716 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 EXOSC6Q5RKV6 272 aaKnown RBP6.35□□□□□ -1.39
BRCA1-216ENST00000484087 CCNJQ5T5M9 372 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 HIST2H2BCQ6DN03 193 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 FIGNL1Q6PIW4 674 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 CASP12Q6UXS9 341 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF730Q6ZMV8 503 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 QSOX2Q6ZRP7 698 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 Q6ZS92 163 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 OLIG3Q7RTU3 272 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 RBM45Q8IUH3 476 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms