RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 GCM2O75603 506 aaPredicted RBP17.67■□□□□ 0.42
HPS4-213ENST00000483631 FKBP2P26885 142 aaKnown RBP17.67■□□□□ 0.42
HPS4-213ENST00000483631 KHKP50053 298 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 CCR4P51679 360 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 SLC18A1P54219 525 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 BST1Q10588 318 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 P2RY6Q15077 328 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 NDUFAF6Q330K2 333 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 TIGD2Q4W5G0 525 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 SPANXN4Q5MJ08 99 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 P3H2Q8IVL5 708 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 TUSC5Q8IXB3 177 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 RFWD2Q8NHY2 731 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 TMEM204Q9BSN7 226 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 THUMPD3Q9BV44 507 aaKnown RBP17.67■□□□□ 0.42
HPS4-213ENST00000483631 CENPHQ9H3R5 247 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 C12orf49Q9H741 205 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 UBTD1Q9HAC8 227 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 ACER3Q9NUN7 267 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 WDR45Q9Y484 360 aa17.67■□□□□ 0.42
HPS4-213ENST00000483631 CPSF4O95639 269 aaKnown RBP17.66■□□□□ 0.42
HPS4-213ENST00000483631 OR12D1P0DN82 309 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 S100A3P33764 101 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 PGM1P36871 562 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 SESN3P58005 492 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 FAM174BQ3ZCQ3 159 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 HHATQ5VTY9 493 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 TYW3Q6IPR3 259 aaKnown RBP17.66■□□□□ 0.42
HPS4-213ENST00000483631 SSX8Q7RTT4 187 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 SPATA19Q7Z5L4 167 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 ANKRD46Q86W74 232 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 CLEC4FQ8N1N0 589 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 ZNF619Q8N2I2 560 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 TRIML2Q8N7C3 387 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 XAGE5Q8WWM1 108 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 ZNF524Q96C55 264 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 ROPN1LQ96C74 230 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 POM121Q96HA1 1249 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 EXOSC3Q9NQT5 275 aaKnown RBP17.66■□□□□ 0.42
HPS4-213ENST00000483631 AIG1Q9NVV5 245 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 THAP1Q9NVV9 213 aa17.66■□□□□ 0.42
HPS4-213ENST00000483631 SPIN1Q9Y657 262 aaPredicted RBP17.66■□□□□ 0.42
HPS4-213ENST00000483631 TRPC5OSA6NMA1 111 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 ZNF724A8MTY0 619 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 FAM171A2A8MVW0 826 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 CYTIPO60759 359 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 CNOT4O95628 575 aaKnown RBP17.65■□□□□ 0.42
HPS4-213ENST00000483631 PAX1P15863 534 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 ENPP1P22413 925 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 APOBEC1P41238 236 aaKnown RBP17.65■□□□□ 0.42
HPS4-213ENST00000483631 MAGEA8P43361 318 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 RNF144AP50876 292 aaPredicted RBP17.65■□□□□ 0.42
HPS4-213ENST00000483631 ANXA11P50995 505 aaKnown RBP17.65■□□□□ 0.42
HPS4-213ENST00000483631 CSNK2A1P68400 391 aaPredicted RBP17.65■□□□□ 0.42
HPS4-213ENST00000483631 Q5PR19 223 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 SFRP5Q5T4F7 317 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 FRRS1Q6ZNA5 592 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 PLEKHM3Q6ZWE6 761 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 NUFIP2Q7Z417 695 aaKnown RBP17.65■□□□□ 0.42
HPS4-213ENST00000483631 GLB1L3Q8NCI6 653 aaPredicted RBP17.65■□□□□ 0.42
HPS4-213ENST00000483631 RAB3IL1Q8TBN0 382 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 IGFBPL1Q8WX77 278 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 PMM1Q92871 262 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 PSD2Q9BQI7 771 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 SLC35A5Q9BS91 424 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 GSX2Q9BZM3 304 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 NGBQ9NPG2 151 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 PNPOQ9NVS9 261 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 MARCOQ9UEW3 520 aaPredicted RBP17.65■□□□□ 0.42
HPS4-213ENST00000483631 PRDM4Q9UKN5 801 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 LIPT1Q9Y234 373 aa17.65■□□□□ 0.42
HPS4-213ENST00000483631 CENPVL1A0A0U1RR11 272 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 SLCO1B7G3V0H7 640 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 SDHDO14521 159 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 HDAC3O15379 428 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 DNPH1O43598 174 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 DIAPH2O60879 1101 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 SNNO75324 88 aaPredicted RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 INHBBP09529 407 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 UBTFL6P0CB48 400 aaPredicted RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 CHI3L1P36222 383 aaPredicted RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 OR3A2P47893 321 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 CLK1P49759 484 aaKnown RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 HPCAP84074 193 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 FUT5Q11128 374 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 PDK3Q15120 406 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 MAPK14Q16539 360 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 ADAM5Q6NVV9 412 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 TNFAIP8L2Q6P589 184 aaPredicted RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 ZNF704Q6ZNC4 412 aaPredicted RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 TMPPEQ6ZT21 453 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 CMIPQ8IY22 773 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 ATP6V1C2Q8NEY4 427 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 HSD17B8Q92506 261 aa17.64■□□□□ 0.41
HPS4-213ENST00000483631 TRNT1Q96Q11 434 aaKnown RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 ING1Q9UK53 422 aaPredicted RBP17.64■□□□□ 0.41
HPS4-213ENST00000483631 NSD1Q96L73 2696 aaPredicted RBP17.63■□□□□ 0.41
HPS4-213ENST00000483631 A0A1W2PNR3 127 aa17.63■□□□□ 0.41
HPS4-213ENST00000483631 HMGN4O00479 90 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms