RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ZNF563Q8TA94 476 aa14.07□□□□□ -0.16
RPP40-206ENST00000483546 CA5BP1Q8WTZ4 195 aa14.07□□□□□ -0.16
RPP40-206ENST00000483546 CNOT9Q92600 299 aaKnown RBP14.07□□□□□ -0.16
RPP40-206ENST00000483546 SDCCAG3Q96C92 435 aa14.07□□□□□ -0.16
RPP40-206ENST00000483546 TRIB1Q96RU8 372 aa14.07□□□□□ -0.16
RPP40-206ENST00000483546 ECSITQ9BQ95 431 aa14.07□□□□□ -0.16
RPP40-206ENST00000483546 SERINC1Q9NRX5 453 aa14.07□□□□□ -0.16
RPP40-206ENST00000483546 CLCF1Q9UBD9 225 aa14.07□□□□□ -0.16
RPP40-206ENST00000483546 RNF6Q9Y252 685 aa14.07□□□□□ -0.16
RPP40-206ENST00000483546 CLDN24A6NM45 220 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 CLCA1A8K7I4 914 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 NDUFAB1O14561 156 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 ADAMDEC1O15204 470 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 SEC14L5O43304 696 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 SHOX2O60902 331 aaPredicted RBP14.06□□□□□ -0.16
RPP40-206ENST00000483546 FAM107AO95990 144 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 FCGR2AP12318 317 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 GP1BBP13224 206 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 PCGF2P35227 344 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 APOBEC1P41238 236 aaKnown RBP14.06□□□□□ -0.16
RPP40-206ENST00000483546 MAP2K6P52564 334 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 SESN3P58005 492 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 PLAURQ03405 335 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 SELPLGQ14242 412 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 TOMM34Q15785 309 aaPredicted RBP14.06□□□□□ -0.16
RPP40-206ENST00000483546 OR2A2Q6IF42 318 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 C3orf33Q6P1S2 294 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 DHRS4L2Q6PKH6 230 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 SEM1Q6ZVN7 128 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 GRINAQ7Z429 371 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 GGNQ86UU5 652 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 VRK2Q86Y07 508 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 PTOV1Q86YD1 416 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 UBQLNLQ8IYU4 475 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 POU5F2Q8N7G0 328 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 OR10A6Q8NH74 314 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 LILRB4Q8NHJ6 448 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 SLC25A43Q8WUT9 341 aaPredicted RBP14.06□□□□□ -0.16
RPP40-206ENST00000483546 RCN3Q96D15 328 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 KLHL15Q96M94 604 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 LRRC37BQ96QE4 947 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 CCT8L2Q96SF2 557 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 HOPXQ9BPY8 73 aaPredicted RBP14.06□□□□□ -0.16
RPP40-206ENST00000483546 SPIN1Q9Y657 262 aaPredicted RBP14.06□□□□□ -0.16
RPP40-206ENST00000483546 MED12LQ86YW9 2145 aa14.06□□□□□ -0.16
RPP40-206ENST00000483546 INTS1Q8N201 2190 aaKnown RBP14.05□□□□□ -0.16
RPP40-206ENST00000483546 A0A0G2JNJ9 132 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 SHISA8B8ZZ34 492 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 IL18BPO95998 194 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 SUCLG1P53597 346 aaKnown RBP14.05□□□□□ -0.16
RPP40-206ENST00000483546 CLDN15P56746 228 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 CLDN20P56880 219 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 PCBP3P57721 371 aaKnown RBP14.05□□□□□ -0.16
RPP40-206ENST00000483546 EPS8Q12929 822 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 SLC25A35Q3KQZ1 300 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 GKAP1Q5VSY0 366 aaPredicted RBP14.05□□□□□ -0.16
RPP40-206ENST00000483546 FAM91A1Q658Y4 838 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 NCCRP1Q6ZVX7 275 aaPredicted RBP14.05□□□□□ -0.16
RPP40-206ENST00000483546 HMGN2P46Q86SG4 172 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 PATL1Q86TB9 770 aaKnown RBP14.05□□□□□ -0.16
RPP40-206ENST00000483546 TREML1Q86YW5 311 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 ZZZ3Q8IYH5 903 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 LILRA2Q8N149 483 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 SMPDL3BQ92485 455 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 REXO5Q96IC2 774 aaKnown RBP14.05□□□□□ -0.16
RPP40-206ENST00000483546 ADGRG7Q96K78 797 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 KLHDC3Q9BQ90 382 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 SLC39A3Q9BRY0 314 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 TIGARQ9NQ88 270 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 ZNF629Q9UEG4 869 aaPredicted RBP14.05□□□□□ -0.16
RPP40-206ENST00000483546 Q9UFV3 132 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 ADAM21Q9UKJ8 722 aa14.05□□□□□ -0.16
RPP40-206ENST00000483546 SLC22A20A6NK97 555 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 EIF1AYO14602 144 aaKnown RBP14.04□□□□□ -0.16
RPP40-206ENST00000483546 DVL2O14641 736 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
RPP40-206ENST00000483546 TOXO94900 526 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 RCBTB2O95199 551 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 CRHP06850 196 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 RYKP34925 604 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 SLC1A3P43003 542 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 CLK1P49759 484 aaKnown RBP14.04□□□□□ -0.16
RPP40-206ENST00000483546 GZMMP51124 257 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 COPZ1P61923 177 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 MERTKQ12866 999 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 VEZF1Q14119 521 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 SGCBQ16585 318 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 VMACQ2NL98 169 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 CTU2Q2VPK5 515 aaKnown RBP14.04□□□□□ -0.16
RPP40-206ENST00000483546 RABL3Q5HYI8 236 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 PLEKHM3Q6ZWE6 761 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 P4HA3Q7Z4N8 544 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 CALHM3Q86XJ0 350 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 ARMC8Q8IUR7 673 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 OR2V1Q8NHB1 315 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 RASSF5Q8WWW0 418 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 NPAS1Q99742 590 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 GPATCH1Q9BRR8 931 aaKnown RBP14.04□□□□□ -0.16
RPP40-206ENST00000483546 PINK1Q9BXM7 581 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 CHST11Q9NPF2 352 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms