RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 UBQLN4Q9NRR5 601 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 PNO1Q9NRX1 252 aaKnown RBP14.5□□□□□ -0.09
RXRA-202ENST00000481739 CCDC59Q9P031 241 aaKnown RBP14.5□□□□□ -0.09
RXRA-202ENST00000481739 H2AFY2Q9P0M6 372 aaPredicted RBP14.5□□□□□ -0.09
RXRA-202ENST00000481739 SEC14L4Q9UDX3 406 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 B3GNT3Q9Y2A9 372 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 CUL9Q8IWT3 2517 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 CSO75390 466 aaKnown RBP14.5□□□□□ -0.09
RXRA-202ENST00000481739 IL33O95760 270 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 IGF2P01344 180 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 HTR1FP30939 366 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 CDH11P55287 796 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 COPZ1P61923 177 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 TRA2AQ13595 282 aaKnown RBP eCLIP14.5□□□□□ -0.09
RXRA-202ENST00000481739 TSTQ16762 297 aaKnown RBP14.5□□□□□ -0.09
RXRA-202ENST00000481739 KLHL26Q53HC5 615 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 ARHGAP40Q5TG30 622 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 SMARCD3Q6STE5 483 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 RNF217Q8TC41 542 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.5□□□□□ -0.09
RXRA-202ENST00000481739 LRFN5Q96NI6 719 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 OPALINQ96PE5 141 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 JAM3Q9BX67 310 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 SLC19A3Q9BZV2 496 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 MMP27Q9H306 513 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 OCIAD1Q9NX40 245 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 TAS2R16Q9NYV7 291 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 FLRT3Q9NZU0 649 aa14.5□□□□□ -0.09
RXRA-202ENST00000481739 OR6C76A6NM76 312 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 HYAL3O43820 417 aaPredicted RBP14.49□□□□□ -0.09
RXRA-202ENST00000481739 SAGP10523 405 aaPredicted RBP14.49□□□□□ -0.09
RXRA-202ENST00000481739 PSMA1P25786 263 aaKnown RBP14.49□□□□□ -0.09
RXRA-202ENST00000481739 GAS1P54826 345 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 RHBDD2Q6NTF9 364 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 LINC00114Q6XXX2 140 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 ATCAYQ86WG3 371 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 MEX3DQ86XN8 651 aaKnown RBP14.49□□□□□ -0.09
RXRA-202ENST00000481739 FAM71CQ8NEG0 241 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 PFN4Q8NHR9 129 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 SLC2A12Q8TD20 617 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 SH3YL1Q96HL8 342 aaPredicted RBP14.49□□□□□ -0.09
RXRA-202ENST00000481739 LCORQ96JN0 433 aaPredicted RBP14.49□□□□□ -0.09
RXRA-202ENST00000481739 SAMD8Q96LT4 415 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 CDC6Q99741 560 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 TGIF2Q9GZN2 237 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 SLIRPQ9GZT3 109 aaKnown RBP14.49□□□□□ -0.09
RXRA-202ENST00000481739 IRF2BPLQ9H1B7 796 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 SIGLEC7Q9Y286 467 aa14.49□□□□□ -0.09
RXRA-202ENST00000481739 BHLHE40O14503 412 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 LRP3O75074 770 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 CBFA2T3O75081 653 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 PPM1BO75688 479 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 SCRG1O75711 98 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 NTN1O95631 604 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 ADRA2AP08913 450 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 HPGDP15428 266 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 MAKP20794 623 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 TBXA2RP21731 343 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 WNT4P56705 351 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 BCDIN3DQ7Z5W3 292 aaKnown RBP14.48□□□□□ -0.09
RXRA-202ENST00000481739 PPP1R3BQ86XI6 285 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 AGBL5Q8NDL9 886 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 PSD4Q8NDX1 1056 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 PLPP5Q8NEB5 264 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 C17orf47Q8NEP4 570 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 GRHL3Q8TE85 626 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 CLIP3Q96DZ5 547 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 CTRCQ99895 268 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 C20orf141Q9NUB4 165 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 NDUFB11Q9NX14 153 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 COPS7AQ9UBW8 275 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 GPR52Q9Y2T5 361 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 OTOGLQ3ZCN5 2332 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 SCDO00767 359 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 TO15178 435 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 GDF9O60383 454 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 DDAH2O95865 285 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 SLC9A3P48764 834 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 MLLT10P55197 1068 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 ZFP36L1Q07352 338 aaKnown RBP14.48□□□□□ -0.09
RXRA-202ENST00000481739 PWWP2BQ6NUJ5 590 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 HSDL2Q6YN16 418 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 RTL4Q6ZR62 310 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 ZSCAN1Q8NBB4 408 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 OR6Q1Q8NGQ2 317 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 ZNF721Q8TF20 911 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 OR8D2Q9GZM6 311 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 ZBTB20Q9HC78 741 aaPredicted RBP14.48□□□□□ -0.09
RXRA-202ENST00000481739 MEPEQ9NQ76 525 aaPredicted RBP14.48□□□□□ -0.09
RXRA-202ENST00000481739 CMC2Q9NRP2 79 aa14.48□□□□□ -0.09
RXRA-202ENST00000481739 EXOGQ9Y2C4 368 aaKnown RBP14.48□□□□□ -0.09
RXRA-202ENST00000481739 OR2W5A6NFC9 320 aa14.47□□□□□ -0.09
RXRA-202ENST00000481739 ZGLP1P0C6A0 271 aa14.47□□□□□ -0.09
RXRA-202ENST00000481739 ZNF12P17014 697 aa14.47□□□□□ -0.09
RXRA-202ENST00000481739 SLC6A6P31641 620 aa14.47□□□□□ -0.09
RXRA-202ENST00000481739 SOX6P35712 828 aa14.47□□□□□ -0.09
RXRA-202ENST00000481739 NSDHLQ15738 373 aa14.47□□□□□ -0.09
RXRA-202ENST00000481739 SSX1Q16384 188 aa14.47□□□□□ -0.09
RXRA-202ENST00000481739 NNATQ16517 81 aa14.47□□□□□ -0.09
RXRA-202ENST00000481739 ZNF404Q494X3 552 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms