RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PRKDCP78527 4128 aaKnown RBP2.9□□□□□ -1.94
SMC6-208ENST00000481708 FAM92AA1XBS5 289 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 MYBPHLA2RUH7 354 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 LMO7DNF2Z398 122 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 H7C1Q1 480 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 LINC01565O15544 149 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 LCMT2O60294 686 aaKnown RBP2.9□□□□□ -1.94
SMC6-208ENST00000481708 GPR137BO60478 399 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 GLRA3O75311 464 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 KRT36O76013 467 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 SMC2O95347 1197 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 BMP10O95393 424 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 STSP08842 583 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 SELEP16581 610 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 ZNF43P17038 809 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 ITGA2P17301 1181 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 DCKP27707 260 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 SSTR2P30874 369 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 ART1P52961 327 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 OR1D5P58170 312 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 ZBTB6Q15916 424 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 SLC5A12Q1EHB4 618 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 ACSF3Q4G176 576 aaPredicted RBP2.9□□□□□ -1.94
SMC6-208ENST00000481708 TMEM107Q6UX40 140 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 RHOUQ7L0Q8 258 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 OR9G4Q8NGQ1 327 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 SGK3Q96BR1 496 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 MTERF3Q96E29 417 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 PPP1R36Q96LQ0 422 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 KRT12Q99456 494 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 FUCA2Q9BTY2 467 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 ROGDIQ9GZN7 287 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 FAM124BQ9H5Z6 455 aaPredicted RBP2.9□□□□□ -1.94
SMC6-208ENST00000481708 DCAF13Q9NV06 445 aaKnown RBP2.9□□□□□ -1.94
SMC6-208ENST00000481708 IL36GQ9NZH8 169 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 PITPNC1Q9UKF7 332 aa2.9□□□□□ -1.94
SMC6-208ENST00000481708 BZW2Q9Y6E2 419 aaKnown RBP2.9□□□□□ -1.94
SMC6-208ENST00000481708 NEDD4P46934 1319 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 SH2D1BO14796 132 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ZNF806P0C7X5 589 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 SMIM10L2AP0DMW4 78 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 SMIM10L2BP0DMW5 78 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 CTNNA2P26232 953 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 GRIA3P42263 894 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 GAS1P54826 345 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 CDH4P55283 916 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 YWHAEP62258 255 aaKnown RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 ZP4Q12836 540 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ELFN2Q5R3F8 820 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 DHRS11Q6UWP2 260 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ODF3L1Q8IXM7 274 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 OR5M9Q8NGP3 310 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 OR6S1Q8NH40 331 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 PIGTQ969N2 578 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 LMLNQ96KR4 655 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 UHRF2Q96PU4 802 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ZNF302Q9NR11 478 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 C1orf123Q9NWV4 160 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ZNF490Q9ULM2 529 aaPredicted RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 DMRT1Q9Y5R6 373 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 KPTNQ9Y664 436 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 NCOR1O75376 2440 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ARHGEF17Q96PE2 2063 aaPredicted RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 CHD8Q9HCK8 2581 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 HECTD4Q9Y4D8 3996 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 KIR2DS5A0A0G2JLQ3 304 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 A0A0J9YYE9 177 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ZNF840PA6NDX5 716 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 KIR2DS3K7RE56 304 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 PRKAB2O43741 272 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 SOX30O94993 753 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 NXPH2O95156 264 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 TRBC1P01850 177 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 FCGR1AP12314 374 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ZNF26P17031 533 aaPredicted RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 ACKR3P25106 362 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ITGA3P26006 1051 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 SELENOPP49908 381 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 RAD23BP54727 409 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 TIMM10P62072 90 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 CX3CL1P78423 397 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 CDH17Q12864 832 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ORC2Q13416 577 aaPredicted RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 SERTAD2Q14140 314 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 TMEM132DQ14C87 1099 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 SF3B4Q15427 424 aaKnown RBP eCLIP2.9□□□□□ -1.95
SMC6-208ENST00000481708 KNOP1Q1ED39 458 aaKnown RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 C20orf194Q5TEA3 1177 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ZNF776Q68DI1 518 aaPredicted RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 CLEC6AQ6EIG7 209 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 PRUNE1Q86TP1 453 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 OR4D6Q8NGJ1 314 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 OR1B1Q8NGR6 318 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 TNFRSF14Q92956 283 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 TSACCQ96A04 125 aaPredicted RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 MTBPQ96DY7 904 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 GLT1D1Q96MS3 346 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 C8orf49Q96NF6 230 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 KCNA7Q96RP8 456 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 MTHFD2LQ9H903 347 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms