RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RFXANKO14593 260 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 GPR171O14626 319 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 EIF1BO60739 113 aaKnown RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 SCN2BO60939 215 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 SLC22A3O75751 556 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 CYP7B1O75881 506 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 CPSF4O95639 269 aaKnown RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 DBIP07108 87 aaKnown RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 IL32P24001 234 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 CCKARP32238 428 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 STX1BP61266 288 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 RPS26P62854 115 aaKnown RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 MERTKQ12866 999 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 ACKR1Q16570 336 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 SYT14P1Q58G82 188 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 TYW3Q6IPR3 259 aaKnown RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 PLXDC2Q6UX71 529 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 STAC2Q6ZMT1 411 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 LRRC74BQ6ZQY2 392 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 Q6ZT83 130 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 P2RY8Q86VZ1 359 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 ANKRD46Q86W74 232 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 P3H2Q8IVL5 708 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 PEX5LQ8IYB4 626 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 GOLGA6L1Q8N7Z2 621 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 RFWD2Q8NHY2 731 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 PIGXQ8TBF5 258 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 NRGNQ92686 78 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 KISS1RQ969F8 398 aaPredicted RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 DDIT4LQ96D03 193 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 PIK3IP1Q96FE7 263 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 MAELQ96JY0 434 aaKnown RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 THUMPD3Q9BV44 507 aaKnown RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 POTEKPQ9BYX7 375 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 C20orf27Q9GZN8 174 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 CXorf56Q9H5V9 222 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 MTHFD2LQ9H903 347 aaPredicted RBP10.22□□□□□ -0.77
CCM2-213ENST00000480658 ACER3Q9NUN7 267 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 P2RX2Q9UBL9 471 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 CHRNA9Q9UGM1 479 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 KIAA1549Q9HCM3 1950 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 CELSR1Q9NYQ6 3014 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 FAM234BA2RU67 622 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 CCDC154A6NI56 674 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 DEFB108AA8MXU0 73 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 SDHDO14521 159 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 ZNF208O43345 1280 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 FCMRO60667 390 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 CYTIPO60759 359 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 TGDSO95455 350 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 ANP32DO95626 131 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 PMS2P2O95744 297 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 OR12D1P0DN82 309 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 NID1P14543 1247 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 IL7RP16871 459 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 CD53P19397 219 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 PGM1P36871 562 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 CRISP3P54108 245 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 SESN3P58005 492 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 MAGOHP61326 146 aaKnown RBP10.21□□□□□ -0.77
CCM2-213ENST00000480658 KCNJ10P78508 379 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 RASGEF1BQ0VAM2 473 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 POU4F3Q15319 338 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 NXNQ6DKJ4 435 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 TNFAIP8L2Q6P589 184 aaPredicted RBP10.21□□□□□ -0.77
CCM2-213ENST00000480658 TFAP2EQ6VUC0 442 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 FRRS1Q6ZNA5 592 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 TMPPEQ6ZT21 453 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 PLEKHM3Q6ZWE6 761 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 GALNT5Q7Z7M9 940 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 BIVMQ86UB2 503 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 ABHD3Q8WU67 409 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 WDR60Q8WVS4 1066 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 ITCHQ96J02 903 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 RADILQ96JH8 1075 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 OR5B2Q96R09 309 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 TMEM45AQ9NWC5 275 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 C6orf203Q9P0P8 240 aaPredicted RBP10.21□□□□□ -0.77
CCM2-213ENST00000480658 TRAPPC4Q9Y296 219 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 GPR45Q9Y5Y3 372 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 KCNE3Q9Y6H6 103 aa10.21□□□□□ -0.77
CCM2-213ENST00000480658 A0A096LPI6 279 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 NPIPA5A0A0B4J1W7 369 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 AGAP5A6NIR3 686 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 NPIPA7E9PJI5 369 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 SULT2B1O00204 365 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 HMGN4O00479 90 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 UBDO15205 165 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 H6PDO95479 791 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 ZCCHC18P0CG32 403 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 NPIPA8P0DM63 369 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 NR2F1P10589 423 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 PAX7P23759 505 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 EPHA3P29320 983 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 DIO1P49895 249 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 POLR2HP52434 150 aaKnown RBP10.2□□□□□ -0.78
CCM2-213ENST00000480658 COPZ1P61923 177 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 ADAM8P78325 824 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 NKX6-1P78426 367 aaPredicted RBP10.2□□□□□ -0.78
CCM2-213ENST00000480658 FADDQ13158 208 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms