RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CSF2RAP15509 400 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 AP1S2P56377 157 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 HSPB3Q12988 150 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 HSD17B12Q53GQ0 312 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 NDUFAF5Q5TEU4 345 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 GRHL2Q6ISB3 625 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 C22orf39Q6P5X5 142 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 HTR3DQ70Z44 454 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 IZUMO1Q8IYV9 350 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 FIBINQ8TAL6 211 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 TRMT10AQ8TBZ6 339 aaKnown RBP9.43□□□□□ -0.9
COMMD4-203ENST00000480484 C16orf78Q8WTQ4 265 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 HMGB4Q8WW32 186 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 NEIL2Q969S2 332 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 IL17FQ96PD4 163 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 REG4Q9BYZ8 158 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 ISG20L2Q9H9L3 353 aaKnown RBP9.43□□□□□ -0.9
COMMD4-203ENST00000480484 FGF20Q9NP95 211 aaPredicted RBP9.43□□□□□ -0.9
COMMD4-203ENST00000480484 FBXL21Q9UKT6 434 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 COPS3Q9UNS2 423 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 HCFC2Q9Y5Z7 792 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 STON1Q9Y6Q2 735 aa9.43□□□□□ -0.9
COMMD4-203ENST00000480484 NEDD8-MDP1E9PL57 170 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 H0YIV9 168 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 SYT5O00445 386 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ZNF593O00488 134 aaPredicted RBP9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ZNF197O14709 1029 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 PDCD5O14737 125 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 MID1O15344 667 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 NDUFA2O43678 99 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 VEGFDO43915 354 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 FZD7O75084 574 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 LATS1O95835 1130 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 TFP02787 698 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 B2MP61769 119 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 IKZF1Q13422 519 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 SNTB2Q13425 540 aaKnown RBP9.42□□□□□ -0.9
COMMD4-203ENST00000480484 SLC36A2Q495M3 483 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 SLC27A4Q6P1M0 643 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 CNKSR3Q6P9H4 555 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ATRAIDQ6UW56 229 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 PRSS45Q7RTY3 260 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 OAFQ86UD1 273 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ADAMTS14Q8WXS8 1223 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ACOT12Q8WYK0 555 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 LMLNQ96KR4 655 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 SLC38A2Q96QD8 506 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 TXN2Q99757 166 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 SLC35C2Q9NQQ7 365 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 KIF25Q9UIL4 384 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 POMT2Q9UKY4 750 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 A0A1W2PPK0 400 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 A0A1W2PRV1 198 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ZC3H12DA2A288 527 aaKnown RBP9.42□□□□□ -0.9
COMMD4-203ENST00000480484 SOX30O94993 753 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 IL2RAP01589 272 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ANKRD34CP0C6C1 535 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 CCL5P13501 91 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 RBMS1P29558 406 aaKnown RBP9.42□□□□□ -0.9
COMMD4-203ENST00000480484 CHAF1BQ13112 559 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 HBMQ6B0K9 141 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 MED27Q6P2C8 311 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ARL9Q6T311 187 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 FAM198BQ6UWH4 519 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 TPRG1Q6ZUI0 275 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ANKRD33Q7Z3H0 272 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 CARFQ8N187 725 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 BBS1Q8NFJ9 593 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 OR51G2Q8NGK0 314 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 OR5D16Q8NGK9 328 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ZNF671Q8TAW3 534 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 APOBEC4Q8WW27 367 aaKnown RBP9.42□□□□□ -0.9
COMMD4-203ENST00000480484 XAGE5Q8WWM1 108 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 GMEB2Q9UKD1 530 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 NTNG1Q9Y2I2 539 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ZNF175Q9Y473 711 aa9.42□□□□□ -0.9
COMMD4-203ENST00000480484 PCYT1BQ9Y5K3 369 aaPredicted RBP9.42□□□□□ -0.9
COMMD4-203ENST00000480484 ATG2BQ96BY7 2078 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 IRGMA1A4Y4 181 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 KRBOX1C9JBD0 128 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 GFYI3L273 518 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 CASC3O15234 703 aaKnown RBP9.41□□□□□ -0.9
COMMD4-203ENST00000480484 CHST10O43529 356 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 C8AP07357 584 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 NME1P15531 152 aaKnown RBP9.41□□□□□ -0.9
COMMD4-203ENST00000480484 BUD31P41223 144 aaPredicted RBP9.41□□□□□ -0.9
COMMD4-203ENST00000480484 PNLIPRP1P54315 467 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 MANFP55145 182 aaKnown RBP9.41□□□□□ -0.9
COMMD4-203ENST00000480484 SMIM11AP58511 58 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 DEFA5Q01523 94 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 ZNF155Q12901 538 aaPredicted RBP9.41□□□□□ -0.9
COMMD4-203ENST00000480484 NHLRC3Q5JS37 347 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 TFAP2EQ6VUC0 442 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 Q6ZVL8 140 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 H1FNTQ75WM6 255 aaPredicted RBP9.41□□□□□ -0.9
COMMD4-203ENST00000480484 AMER3Q8N944 861 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 CYB5D2Q8WUJ1 264 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 ZNF354BQ96LW1 612 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 GSDMCQ9BYG8 508 aa9.41□□□□□ -0.9
COMMD4-203ENST00000480484 KCNK12Q9HB15 430 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms