RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	C16orf62	Q7Z3J2	963 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	RNF130	Q86XS8	419 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	SPPL2A	Q8TCT8	520 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	TRMT61A	Q96FX7	289 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	NSL1	Q96IY1	281 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	ANKRD27	Q96NW4	1050 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	COL21A1	Q96P44	957 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	SLC39A3	Q9BRY0	314 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	ANKRA2	Q9H9E1	313 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	CACYBP	Q9HB71	228 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	FREM1	Q5H8C1	2179 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894		H0Y3Z8	333 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	C16orf97	H3BN30	126 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	FBP2	O00757	339 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	AIM2	O14862	343 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	POU2F1	P14859	743 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	CALB2	P22676	271 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	PTPN6	P29350	595 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	RPS4X	P62701	263 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	SNTA1	Q13424	505 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	RUNDC3A	Q59EK9	446 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	SLC30A8	Q8IWU4	369 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	FITM2	Q8N6M3	262 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	SLC16A11	Q8NCK7	471 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	RCN3	Q96D15	328 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	SLC35A4	Q96G79	324 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	C16orf58	Q96GQ5	468 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	OR7D2	Q96RA2	312 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	OR51I1	Q9H343	314 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	P2RX2	Q9UBL9	471 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	LPAR3	Q9UBY5	353 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	WIF1	Q9Y5W5	379 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	DYSF	O75923	2080 aa		13.98	□□□□□ -0.17
HDLBP-238	ENST00000479894	OVOL3	O00110	214 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	HS3ST1	O14792	307 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	DNAJA2	O60884	412 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	STX11	O75558	287 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	ATP5H	O75947	161 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	IL33	O95760	270 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	HPGD	P15428	266 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	GPX2	P18283	190 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	NUDT2	P50583	147 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	RASSF2	P50749	326 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	CORO7	P57737	925 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	DSTN	P60981	165 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	MXRA7	P84157	204 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	RGN	Q15493	299 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	DUSP5	Q16690	384 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	EXOSC6	Q5RKV6	272 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	PRAMEF8	Q5VWM4	474 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	PRAMEF7	Q5VXH5	474 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	TIGD3	Q6B0B8	471 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	OR2A2	Q6IF42	318 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	C16orf89	Q6UX73	402 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	RETREG3	Q86VR2	466 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	TREML1	Q86YW5	311 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	GRAMD2A	Q8IUY3	354 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	POU5F2	Q8N7G0	328 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	ZNF527	Q8NB42	609 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	XAGE5	Q8WWM1	108 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	ROBO4	Q8WZ75	1007 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	TMBIM1	Q969X1	311 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	STARD4	Q96DR4	205 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	OMA1	Q96E52	524 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	TRNT1	Q96Q11	434 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	ECSIT	Q9BQ95	431 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	SDHAF3	Q9NRP4	125 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	VAPA	Q9P0L0	249 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	DTX4	Q9Y2E6	619 aa		13.97	□□□□□ -0.17
HDLBP-238	ENST00000479894	TRBV5-3	A0A0A0MS03	114 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	CCT8L1P	A6NM43	557 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	C5orf58	C9J3I9	102 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	HCRTR2	O43614	444 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	NGFR	P08138	427 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	NR2F1	P10589	423 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	ACP2	P11117	423 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	BMP2	P12643	396 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	CASP3	P42574	277 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	CBX1	P83916	185 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	RBBP4	Q09028	425 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	ARHGAP11B	Q3KRB8	267 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	SPATS1	Q496A3	300 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	C6orf52	Q5T4I8	152 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	BICRAL	Q6AI39	1079 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	ERICH5	Q6P6B1	374 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	TMEM81	Q6P7N7	255 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	DNM1P46	Q6ZS02	220 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	ZNF550	Q7Z398	422 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	SERPINA11	Q86U17	422 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	YRDC	Q86U90	279 aa	Known RBP	13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	CDS1	Q92903	461 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	UBQLN4	Q9NRR5	601 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	SLC25A37	Q9NYZ2	338 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms