RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CADP27708 2225 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 IGKV3D-15A0A087WSY6 115 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 OIP5O43482 229 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 CRCPO75575 148 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 CCR4P51679 360 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 PDK3Q15120 406 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 KLHL26Q53HC5 615 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 ANKRD26P1Q6NSI1 321 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 LRIG3Q6UXM1 1119 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 LCA5Q86VQ0 697 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 ZNF614Q8N883 585 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 OR5W2Q8NH69 310 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 ZFAND2BQ8WV99 257 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 FBXO17Q96EF6 278 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 METTL2AQ96IZ6 378 aaKnown RBP14.11□□□□□ -0.15
DDX56-210ENST00000479440 BPESC1Q9GZL8 116 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 SERINC1Q9NRX5 453 aa14.11□□□□□ -0.15
DDX56-210ENST00000479440 ACSS1Q9NUB1 689 aaPredicted RBP14.11□□□□□ -0.15
DDX56-210ENST00000479440 ZCCHC3Q9NUD5 404 aaKnown RBP14.11□□□□□ -0.15
DDX56-210ENST00000479440 H3BQF6 201 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 ETV2O00321 342 aaPredicted RBP14.1□□□□□ -0.15
DDX56-210ENST00000479440 GPR171O14626 319 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 H6PDO95479 791 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 FRKP42685 505 aaPredicted RBP14.1□□□□□ -0.15
DDX56-210ENST00000479440 DIO1P49895 249 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 PRKAA2P54646 552 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 FOXA1P55317 472 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 QPRTQ15274 297 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 GABRA6Q16445 453 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 SWI5Q1ZZU3 235 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 C1QTNF12Q5T7M4 302 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 SLC46A3Q7Z3Q1 461 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 TRIM46Q7Z4K8 759 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 C1orf162Q8NEQ5 155 aaPredicted RBP14.1□□□□□ -0.15
DDX56-210ENST00000479440 SGMS2Q8NHU3 365 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 RFWD2Q8NHY2 731 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 SLC25A43Q8WUT9 341 aaPredicted RBP14.1□□□□□ -0.15
DDX56-210ENST00000479440 CDS1Q92903 461 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 C16orf58Q96GQ5 468 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 EGLN2Q96KS0 407 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 MUS81Q96NY9 551 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 FOXN4Q96NZ1 517 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 PIGUQ9H490 435 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 FREM1Q5H8C1 2179 aa14.1□□□□□ -0.15
DDX56-210ENST00000479440 MALRD1Q5VYJ5 2156 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 A0A0A6YYJ9 748 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 NPIPA5A0A0B4J1W7 369 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 NPIPA7E9PJI5 369 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 ATP6V1G2-DDX39BF2Z307 99 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 POC1B-GALNT4F8VUJ3 575 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 SLCO1B7G3V0H7 640 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 SULT2B1O00204 365 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 ZNF264O43296 627 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 EIF4E2O60573 245 aaKnown RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 TBX19O60806 448 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 SNRPAP09012 282 aaKnown RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 NPIPA8P0DM63 369 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 UBL4AP11441 157 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 DDX5P17844 614 aaKnown RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 PCMT1P22061 227 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 RNF144AP50876 292 aaPredicted RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 ATP12AP54707 1039 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 LASP1Q14847 261 aaKnown RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 NDUFAF6Q330K2 333 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 ZNF385BQ569K4 471 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 EXOSC6Q5RKV6 272 aaKnown RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 DCST2Q5T1A1 773 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX56-210ENST00000479440 CDC73Q6P1J9 531 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 TMPPEQ6ZT21 453 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 PIGXQ8TBF5 258 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 CCT7Q99832 543 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 VRK1Q99986 396 aaPredicted RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 C1QTNF6Q9BXI9 259 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 BHLHE41Q9C0J9 482 aaPredicted RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 CDC42EP4Q9H3Q1 356 aaKnown RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 GSTO2Q9H4Y5 243 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 REEP4Q9H6H4 257 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 ZDHHC18Q9NUE0 388 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 TMEM216Q9P0N5 145 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 SH3BP4Q9P0V3 963 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 TMEFF2Q9UIK5 374 aaPredicted RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 DCTN4Q9UJW0 460 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 DTNAQ9Y4J8 743 aa14.09□□□□□ -0.15
DDX56-210ENST00000479440 SPIN1Q9Y657 262 aaPredicted RBP14.09□□□□□ -0.15
DDX56-210ENST00000479440 MRPL33O75394 65 aaKnown RBP14.08□□□□□ -0.16
DDX56-210ENST00000479440 SEC22BO75396 215 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 HMGN2P05204 90 aaKnown RBP14.08□□□□□ -0.16
DDX56-210ENST00000479440 ITGA5P08648 1049 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 KRT16P08779 473 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 CHN2P52757 468 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 ACTG1P63261 375 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 TIGD2Q4W5G0 525 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 SYT14P1Q58G82 188 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 KLHL24Q6TFL4 600 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 MTDHQ86UE4 582 aaKnown RBP14.08□□□□□ -0.16
DDX56-210ENST00000479440 RELL1Q8IUW5 271 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 LINC01356Q8N9X3 169 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 DCAKDQ8WVC6 231 aa14.08□□□□□ -0.16
DDX56-210ENST00000479440 ST8SIA1Q92185 356 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms