RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 LAP3P28838 519 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 TIA1P31483 386 aaKnown RBP eCLIP19.73■□□□□ 0.752e-10■□□□□ 10.9
SDF4-206ENST00000478938 AP3S2P59780 193 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 SKP2Q13309 424 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 AKIRIN2Q53H80 203 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 BAIAP2L2Q6UXY1 529 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 MRGPREQ86SM8 312 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 NUDT13Q86X67 352 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 SPATA2LQ8IUW3 424 aaPredicted RBP19.73■□□□□ 0.75
SDF4-206ENST00000478938 APCDD1Q8J025 514 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 ACOT11Q8WXI4 607 aaPredicted RBP19.73■□□□□ 0.75
SDF4-206ENST00000478938 ZNF230Q9UIE0 474 aaPredicted RBP19.73■□□□□ 0.75
SDF4-206ENST00000478938 MYO16Q9Y6X6 1858 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 KANTRA0A1W2PQU2 76 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 RFPL4AA6NLU0 287 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 RFPL4AL1F8VTS6 287 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 GPR37L1O60883 481 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 C3orf33Q6P1S2 294 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 PLBD1Q6P4A8 553 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 OLIG3Q7RTU3 272 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 MON1AQ86VX9 555 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 CD99L2Q8TCZ2 262 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 TNFAIP8L1Q8WVP5 186 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 PPCDCQ96CD2 204 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 UTP23Q9BRU9 249 aaKnown RBP19.73■□□□□ 0.75
SDF4-206ENST00000478938 SGK2Q9HBY8 427 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 KLHL9Q9P2J3 617 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 GREB1Q4ZG55 1949 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 ANTXRLA6NF34 631 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 DRGXA6NNA5 263 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 LATS1O95835 1130 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 APEHP13798 732 aaKnown RBP19.72■□□□□ 0.75
SDF4-206ENST00000478938 GNSP15586 552 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 CASP6P55212 293 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 ACSM3Q53FZ2 586 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 CDPF1Q6NVV7 123 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 ETV3LQ6ZN32 361 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 SLC29A4Q7RTT9 530 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 SLC36A1Q7Z2H8 476 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 LRRC56Q8IYG6 542 aaPredicted RBP19.72■□□□□ 0.75
SDF4-206ENST00000478938 MMP21Q8N119 569 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 DNAAF1Q8NEP3 725 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 BRIX1Q8TDN6 353 aaKnown RBP19.72■□□□□ 0.75
SDF4-206ENST00000478938 RAB7BQ96AH8 199 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 TRIM36Q9NQ86 728 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 ABRACLQ9P1F3 81 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 NPFFR2Q9Y5X5 522 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 OR14I1A6ND48 311 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 SAP18O00422 153 aaKnown RBP19.72■□□□□ 0.75
SDF4-206ENST00000478938 SYT5O00445 386 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 MAT2AP31153 395 aaKnown RBP19.72■□□□□ 0.75
SDF4-206ENST00000478938 PFN3P60673 137 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 BDH1Q02338 343 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 MAPK14Q16539 360 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 OLFML2AQ68BL7 652 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 PXKQ7Z7A4 578 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 PXYLP1Q8TE99 480 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 DERL3Q96Q80 235 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 NMRK2Q9NPI5 230 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 ASF1AQ9Y294 204 aa19.72■□□□□ 0.75
SDF4-206ENST00000478938 AK6Q9Y3D8 172 aaKnown RBP19.72■□□□□ 0.75
SDF4-206ENST00000478938 ZNF705EA8MWA4 302 aaPredicted RBP19.71■□□□□ 0.75
SDF4-206ENST00000478938 GABARAPH6UMI1 98 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 PHYHO14832 338 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 SLC31A2O15432 143 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 ANXA2P07355 339 aaKnown RBP19.71■□□□□ 0.75
SDF4-206ENST00000478938 SFTPCP11686 197 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 TYMPP19971 482 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 HTR1FP30939 366 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 CXCL9Q07325 125 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 IER5LQ5T953 404 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 CYB5R2Q6BCY4 276 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.71■□□□□ 0.75
SDF4-206ENST00000478938 TCF7L1Q9HCS4 588 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 PCDHGA1Q9Y5H4 931 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 A0A1B0GWJ7 208 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 ANKRD20A5PA0PJZ0 165 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 RHPN2P1A8MT19 583 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 SURF4O15260 269 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 XPAP23025 273 aaPredicted RBP19.71■□□□□ 0.75
SDF4-206ENST00000478938 ACRV1P26436 265 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 SREBF2Q12772 1141 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 NAE1Q13564 534 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 VRK3Q8IV63 474 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 NKAIN4Q8IVV8 208 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 AKR7LQ8NHP1 331 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 BBS10Q8TAM1 723 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 CNTNAP3BQ96NU0 1288 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 CXorf36Q9H7Y0 433 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 CRLS1Q9UJA2 301 aa19.71■□□□□ 0.75
SDF4-206ENST00000478938 OIP5O43482 229 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 FURINP09958 794 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 CCR7P32248 378 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 AKR1C3P42330 323 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 TGIF1Q15583 401 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 SSX2Q16385 188 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 UBE2NLQ5JXB2 153 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 LRRTM1Q86UE6 522 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 ACBD7Q8N6N7 88 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 OR10H5Q8NGA6 315 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms