RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC25A53Q5H9E4 307 aa15.06■□□□□ 0
VIM-204ENST00000478746 SYT10Q6XYQ8 523 aa15.06■□□□□ 0
VIM-204ENST00000478746 TRIM46Q7Z4K8 759 aa15.06■□□□□ 0
VIM-204ENST00000478746 SLC22A9Q8IVM8 553 aa15.06■□□□□ 0
VIM-204ENST00000478746 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.06■□□□□ 0
VIM-204ENST00000478746 ZNF540Q8NDQ6 660 aa15.06■□□□□ 0
VIM-204ENST00000478746 RFWD2Q8NHY2 731 aa15.06■□□□□ 0
VIM-204ENST00000478746 APH1AQ96BI3 265 aa15.06■□□□□ 0
VIM-204ENST00000478746 ZNF524Q96C55 264 aa15.06■□□□□ 0
VIM-204ENST00000478746 ASB6Q9NWX5 421 aa15.06■□□□□ 0
VIM-204ENST00000478746 TAS2R16Q9NYV7 291 aa15.06■□□□□ 0
VIM-204ENST00000478746 NOSIPQ9Y314 301 aaKnown RBP15.06■□□□□ 0
VIM-204ENST00000478746 NPIPA5A0A0B4J1W7 369 aa15.05■□□□□ -0
VIM-204ENST00000478746 NPIPA7E9PJI5 369 aa15.05■□□□□ -0
VIM-204ENST00000478746 POC1B-GALNT4F8VUJ3 575 aa15.05■□□□□ -0
VIM-204ENST00000478746 SEC22BO75396 215 aa15.05■□□□□ -0
VIM-204ENST00000478746 NPIPA8P0DM63 369 aa15.05■□□□□ -0
VIM-204ENST00000478746 PRKAA2P54646 552 aa15.05■□□□□ -0
VIM-204ENST00000478746 GABRA6Q16445 453 aa15.05■□□□□ -0
VIM-204ENST00000478746 MST1LQ2TV78 715 aa15.05■□□□□ -0
VIM-204ENST00000478746 NDUFAF6Q330K2 333 aa15.05■□□□□ -0
VIM-204ENST00000478746 BHLHB9Q6PI77 547 aa15.05■□□□□ -0
VIM-204ENST00000478746 OR5W2Q8NH69 310 aa15.05■□□□□ -0
VIM-204ENST00000478746 CDS1Q92903 461 aa15.05■□□□□ -0
VIM-204ENST00000478746 L3HYPDHQ96EM0 354 aa15.05■□□□□ -0
VIM-204ENST00000478746 SORCS2Q96PQ0 1159 aa15.05■□□□□ -0
VIM-204ENST00000478746 FUT8Q9BYC5 575 aa15.05■□□□□ -0
VIM-204ENST00000478746 ANKZF1Q9H8Y5 726 aa15.05■□□□□ -0
VIM-204ENST00000478746 MYOZ1Q9NP98 299 aaPredicted RBP15.05■□□□□ -0
VIM-204ENST00000478746 RRAGDQ9NQL2 400 aaPredicted RBP15.05■□□□□ -0
VIM-204ENST00000478746 SH3BP4Q9P0V3 963 aa15.05■□□□□ -0
VIM-204ENST00000478746 TMEFF2Q9UIK5 374 aaPredicted RBP15.05■□□□□ -0
VIM-204ENST00000478746 TRAF6Q9Y4K3 522 aa15.05■□□□□ -0
VIM-204ENST00000478746 MEGF8Q7Z7M0 2845 aa15.04■□□□□ -0
VIM-204ENST00000478746 IGKV3D-15A0A087WSY6 115 aa15.04■□□□□ -0
VIM-204ENST00000478746 SULT2B1O00204 365 aa15.04■□□□□ -0
VIM-204ENST00000478746 AKAP10O43572 662 aa15.04■□□□□ -0
VIM-204ENST00000478746 RSL1D1O76021 490 aaKnown RBP15.04■□□□□ -0
VIM-204ENST00000478746 H6PDO95479 791 aa15.04■□□□□ -0
VIM-204ENST00000478746 SNRPAP09012 282 aaKnown RBP15.04■□□□□ -0
VIM-204ENST00000478746 DIO1P49895 249 aa15.04■□□□□ -0
VIM-204ENST00000478746 CSNK2A1P68400 391 aaPredicted RBP15.04■□□□□ -0
VIM-204ENST00000478746 MLC1Q15049 377 aa15.04■□□□□ -0
VIM-204ENST00000478746 PDK3Q15120 406 aa15.04■□□□□ -0
VIM-204ENST00000478746 QPRTQ15274 297 aa15.04■□□□□ -0
VIM-204ENST00000478746 ZNF385BQ569K4 471 aa15.04■□□□□ -0
VIM-204ENST00000478746 EXOSC6Q5RKV6 272 aaKnown RBP15.04■□□□□ -0
VIM-204ENST00000478746 C3orf33Q6P1S2 294 aa15.04■□□□□ -0
VIM-204ENST00000478746 TMPPEQ6ZT21 453 aa15.04■□□□□ -0
VIM-204ENST00000478746 MTDHQ86UE4 582 aaKnown RBP15.04■□□□□ -0
VIM-204ENST00000478746 WDR31Q8NA23 367 aa15.04■□□□□ -0
VIM-204ENST00000478746 TOR1AIP2Q8NFQ8 470 aa15.04■□□□□ -0
VIM-204ENST00000478746 DCAKDQ8WVC6 231 aa15.04■□□□□ -0
VIM-204ENST00000478746 PPCDCQ96CD2 204 aa15.04■□□□□ -0
VIM-204ENST00000478746 STACQ99469 402 aa15.04■□□□□ -0
VIM-204ENST00000478746 VRK1Q99986 396 aaPredicted RBP15.04■□□□□ -0
VIM-204ENST00000478746 SOX7Q9BT81 388 aa15.04■□□□□ -0
VIM-204ENST00000478746 PIGUQ9H490 435 aa15.04■□□□□ -0
VIM-204ENST00000478746 REEP4Q9H6H4 257 aa15.04■□□□□ -0
VIM-204ENST00000478746 DUSP22Q9NRW4 184 aa15.04■□□□□ -0
VIM-204ENST00000478746 SERINC1Q9NRX5 453 aa15.04■□□□□ -0
VIM-204ENST00000478746 ACSS1Q9NUB1 689 aaPredicted RBP15.04■□□□□ -0
VIM-204ENST00000478746 ZNF180Q9UJW8 692 aa15.04■□□□□ -0
VIM-204ENST00000478746 KCNAB3O43448 404 aa15.03■□□□□ -0
VIM-204ENST00000478746 HMGN2P05204 90 aaKnown RBP15.03■□□□□ -0
VIM-204ENST00000478746 FRKP42685 505 aaPredicted RBP15.03■□□□□ -0
VIM-204ENST00000478746 ATP12AP54707 1039 aa15.03■□□□□ -0
VIM-204ENST00000478746 FOXG1P55316 489 aaPredicted RBP15.03■□□□□ -0
VIM-204ENST00000478746 CBFBQ13951 182 aa15.03■□□□□ -0
VIM-204ENST00000478746 KIAA0040Q15053 153 aa15.03■□□□□ -0
VIM-204ENST00000478746 TIGD2Q4W5G0 525 aa15.03■□□□□ -0
VIM-204ENST00000478746 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.03■□□□□ -0
VIM-204ENST00000478746 C8orf74Q6P047 294 aa15.03■□□□□ -0
VIM-204ENST00000478746 CDC73Q6P1J9 531 aa15.03■□□□□ -0
VIM-204ENST00000478746 RELL1Q8IUW5 271 aa15.03■□□□□ -0
VIM-204ENST00000478746 TMCO5AQ8N6Q1 288 aa15.03■□□□□ -0
VIM-204ENST00000478746 CCNYL1Q8N7R7 359 aa15.03■□□□□ -0
VIM-204ENST00000478746 ZNF614Q8N883 585 aa15.03■□□□□ -0
VIM-204ENST00000478746 ZNF764Q96H86 408 aaPredicted RBP15.03■□□□□ -0
VIM-204ENST00000478746 METTL2AQ96IZ6 378 aaKnown RBP15.03■□□□□ -0
VIM-204ENST00000478746 BHLHE41Q9C0J9 482 aaPredicted RBP15.03■□□□□ -0
VIM-204ENST00000478746 BPESC1Q9GZL8 116 aa15.03■□□□□ -0
VIM-204ENST00000478746 QRSL1Q9H0R6 528 aaKnown RBP15.03■□□□□ -0
VIM-204ENST00000478746 CDC42EP4Q9H3Q1 356 aaKnown RBP15.03■□□□□ -0
VIM-204ENST00000478746 GSTO2Q9H4Y5 243 aa15.03■□□□□ -0
VIM-204ENST00000478746 DTNAQ9Y4J8 743 aa15.03■□□□□ -0
VIM-204ENST00000478746 LRP5LA4QPB2 252 aa15.02■□□□□ -0
VIM-204ENST00000478746 ATP6V1G2-DDX39BF2Z307 99 aa15.02■□□□□ -0
VIM-204ENST00000478746 ETV2O00321 342 aaPredicted RBP15.02■□□□□ -0
VIM-204ENST00000478746 GPR171O14626 319 aa15.02■□□□□ -0
VIM-204ENST00000478746 ZNF264O43296 627 aa15.02■□□□□ -0
VIM-204ENST00000478746 EIF4E2O60573 245 aaKnown RBP15.02■□□□□ -0
VIM-204ENST00000478746 TBX19O60806 448 aa15.02■□□□□ -0
VIM-204ENST00000478746 MRPL33O75394 65 aaKnown RBP15.02■□□□□ -0
VIM-204ENST00000478746 CRCPO75575 148 aa15.02■□□□□ -0
VIM-204ENST00000478746 EGR1P18146 543 aa15.02■□□□□ -0
VIM-204ENST00000478746 NTF4P34130 210 aa15.02■□□□□ -0
VIM-204ENST00000478746 CCR4P51679 360 aa15.02■□□□□ -0
VIM-204ENST00000478746 SNRPD2P62316 118 aaKnown RBP15.02■□□□□ -0
VIM-204ENST00000478746 LASP1Q14847 261 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms