RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 ART5Q96L15 291 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ZNF354BQ96LW1 612 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 VSTM2LQ96N03 204 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 DGAT2Q96PD7 388 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 BTBD9Q96Q07 612 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 RASL10BQ96S79 203 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 TRIM4Q9C037 500 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 KCNK13Q9HB14 408 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 MED4Q9NPJ6 270 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 SLC35C2Q9NQQ7 365 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 PNO1Q9NRX1 252 aaKnown RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 ARL8BQ9NVJ2 186 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 NKIRAS1Q9NYS0 192 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 GIMAP2Q9UG22 337 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ATP6V1HQ9UI12 483 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 UTS2RQ9UKP6 389 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 PCDHGB3Q9Y5G1 929 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 CLCA3PQ9Y6N3 262 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ZNF407Q9C0G0 2248 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ESPL1Q14674 2120 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 NCKAP5O14513 1909 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SPTBN1Q01082 2364 aaKnown RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 TRAV17A0A0B4J275 112 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 GNG14A0A1W2PPG7 69 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 HMX3A6NHT5 357 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 GABRR3A8MPY1 467 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SLCO1B7G3V0H7 640 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ADAM10O14672 748 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SCAMP2O15127 329 aaKnown RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 TO15178 435 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 NME2P1O60361 137 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SCN2BO60939 215 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SEC22BO75396 215 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ALDOCP09972 364 aaKnown RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 PRPS2P11908 318 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 COX7A2P14406 83 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 PIK3R1P27986 724 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ASMTP46597 345 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 EMDP50402 254 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 HLCSP50747 726 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 TDGF1P3P51864 188 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 DIO3P55073 304 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 CLDN8P56748 225 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ACTN3Q08043 901 aaPredicted RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 FOXF2Q12947 444 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 RPS6KA2Q15349 733 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ZNF791Q3KP31 576 aaPredicted RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 GALNTL6Q49A17 601 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 PIGGQ5H8A4 983 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 COLEC12Q5KU26 742 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 IRAK1BP1Q5VVH5 260 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ATG16L1Q676U5 607 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 TMEM81Q6P7N7 255 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 HSDL2Q6YN16 418 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 YTHDF3Q7Z739 585 aaKnown RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 RPS19BP1Q86WX3 136 aaKnown RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 TICAM1Q8IUC6 712 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 DDIASQ8IXT1 998 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 OR7G2Q8NG99 324 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 OR9A2Q8NGT5 310 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 C16orf52Q8NHV5 167 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 MGARPQ8TDB4 240 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 CKAP2Q8WWK9 683 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 RIT1Q92963 219 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 MIB2Q96AX9 1013 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 PPWD1Q96BP3 646 aaKnown RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 TESCQ96BS2 214 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 C3orf49Q96BT1 292 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 KLHL29Q96CT2 875 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 TUBGCP3Q96CW5 907 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 RBM18Q96H35 190 aaKnown RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 ZNF845Q96IR2 970 aaPredicted RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 AMDHD1Q96NU7 426 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 TSSK3Q96PN8 268 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 TAAR6Q96RI8 345 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SLX1AQ9BQ83 275 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 TMEM120AQ9BXJ8 343 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 NUF2Q9BZD4 464 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 OR8D2Q9GZM6 311 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 WWTR1Q9GZV5 400 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 GLIPR2Q9H4G4 154 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 REEP4Q9H6H4 257 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SLCO1B3Q9NPD5 702 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 PFDN4Q9NQP4 134 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SIRT3Q9NTG7 399 aaPredicted RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 ACSS1Q9NUB1 689 aaPredicted RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 AIG1Q9NVV5 245 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 TEKT2Q9UIF3 430 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 PSME2Q9UL46 239 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ERVK-11Q9UQG0 969 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 ERVK-19Q9WJR5 959 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 DTX4Q9Y2E6 619 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 NTNG1Q9Y2I2 539 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 YARS2Q9Y2Z4 477 aaKnown RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 FIS1Q9Y3D6 152 aa4.77□□□□□ -1.65
VPS45-207ENST00000477558 SIRT4Q9Y6E7 314 aaPredicted RBP4.77□□□□□ -1.65
VPS45-207ENST00000477558 GTF3C1Q12789 2109 aa4.76□□□□□ -1.65
VPS45-207ENST00000477558 NCOA6Q14686 2063 aaPredicted RBP4.76□□□□□ -1.65
VPS45-207ENST00000477558 NINQ8N4C6 2090 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms