RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DCAF12Q5T6F0 453 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 CBARPQ8N350 705 aaPredicted RBP17.42■□□□□ 0.38
VARS2-209ENST00000477288 HHIPL1Q96JK4 782 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 MYADMQ96S97 322 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 CLSTN3Q9BQT9 956 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 SLC46A2Q9BY10 475 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 FAM234AQ9H0X4 552 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 SLC6A5Q9Y345 797 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 ZIC2O95409 532 aaPredicted RBP17.41■□□□□ 0.38
VARS2-209ENST00000477288 OR1D4P47884 311 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 HSD17B7P56937 341 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 METTL11BQ5VVY1 283 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 NICN1Q9BSH3 213 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 TRAPPC2LH3BP13 241 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 RNASET2O00584 256 aaKnown RBP17.41■□□□□ 0.38
VARS2-209ENST00000477288 RPS17P08708 135 aaKnown RBP17.41■□□□□ 0.38
VARS2-209ENST00000477288 PSMB5P28074 263 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 SULF2Q8IWU5 870 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 TCTEX1D2Q8WW35 142 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 RSPRY1Q96DX4 576 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 HMGN2P05204 90 aaKnown RBP17.41■□□□□ 0.38
VARS2-209ENST00000477288 CDK1P06493 297 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 ATG4BQ9Y4P1 393 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 C17orf113A0A1B0GUU1 675 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 KDM4EB2RXH2 506 aaPredicted RBP17.41■□□□□ 0.38
VARS2-209ENST00000477288 CNMDO75829 334 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 CHRNB1P11230 501 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 SPOCK1Q08629 439 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 FAPQ12884 760 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 SLC15A4Q8N697 577 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 PHOSPHO2Q8TCD6 241 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 TRUB1Q8WWH5 349 aaKnown RBP17.41■□□□□ 0.38
VARS2-209ENST00000477288 SLC6A16Q9GZN6 736 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 KCNJ16Q9NPI9 418 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 IL17CQ9P0M4 197 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 SULT1B1O43704 296 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 CXCR4P61073 352 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 RNF4P78317 190 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 LCN8Q6JVE9 175 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 HEPHL1Q6MZM0 1159 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 PAQR8Q8TEZ7 354 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 RAB39BQ96DA2 213 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 BTNL2Q9UIR0 455 aa17.41■□□□□ 0.38
VARS2-209ENST00000477288 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 SLC16A7O60669 478 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 SCRG1O75711 98 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 HTR3DQ70Z44 454 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 MKXQ8IYA7 352 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 DNAJC22Q8N4W6 341 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 C12orf45Q8N5I9 185 aaPredicted RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 SUMF2Q8NBJ7 301 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 SAMD10Q9BYL1 202 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 MRPL33O75394 65 aaKnown RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 HLA-DMAP28067 261 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 IL2RGP31785 369 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 CCNJQ5T5M9 372 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 MRPL43Q8N983 215 aaKnown RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 BSCL2Q96G97 398 aaPredicted RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 MROH6A6NGR9 719 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 A6NIN4 97 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 FOXE1O00358 373 aaPredicted RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 NME4O00746 187 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 MYF6P23409 242 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 GDPD1Q8N9F7 314 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 PAPD5Q8NDF8 572 aaKnown RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 NUBP2Q9Y5Y2 271 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 COL2A1P02458 1487 aaPredicted RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 ZNF705GA8MUZ8 300 aaPredicted RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 CTSCP53634 463 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 C1orf220Q5T0J3 134 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 RANBP10Q6VN20 620 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 TMEM185AQ8NFB2 350 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 ZNF419Q96HQ0 510 aaPredicted RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 C4orf36Q96KX1 117 aa17.4■□□□□ 0.38
VARS2-209ENST00000477288 ZNF587Q96SQ5 575 aaPredicted RBP17.4■□□□□ 0.38
VARS2-209ENST00000477288 HSPB6O14558 160 aa17.39■□□□□ 0.38
VARS2-209ENST00000477288 ACPPP15309 386 aa17.39■□□□□ 0.38
VARS2-209ENST00000477288 KITLGP21583 273 aa17.39■□□□□ 0.38
VARS2-209ENST00000477288 PCGF2P35227 344 aa17.39■□□□□ 0.38
VARS2-209ENST00000477288 PTGER4P35408 488 aa17.39■□□□□ 0.38
VARS2-209ENST00000477288 OPN5Q6U736 354 aa17.39■□□□□ 0.38
VARS2-209ENST00000477288 TECPR1Q7Z6L1 1165 aa17.39■□□□□ 0.38
VARS2-209ENST00000477288 PM20D2Q8IYS1 436 aa17.39■□□□□ 0.38
VARS2-209ENST00000477288 DDX31Q9H8H2 851 aaKnown RBP17.39■□□□□ 0.38
VARS2-209ENST00000477288 ARRDC3Q96B67 414 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 ZNF775Q96BV0 537 aaPredicted RBP17.39■□□□□ 0.37
VARS2-209ENST00000477288 FIZ1Q96SL8 496 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 ULBP2Q9BZM5 246 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 SIT1Q9Y3P8 196 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 MT-ND4P03905 459 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 VASNQ6EMK4 673 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 C15orf39Q6ZRI6 1047 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 FAM57BQ71RH2 274 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 OR51D1Q8NGF3 324 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 NGBQ9NPG2 151 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 OLAHQ9NV23 265 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 IGKV6D-21A0A0A0MT36 114 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 PIP5K1CO60331 668 aa17.39■□□□□ 0.37
VARS2-209ENST00000477288 SRPX2O60687 465 aaPredicted RBP17.39■□□□□ 0.37
VARS2-209ENST00000477288 IL13RA1P78552 427 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms