RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 NANPQ8TBE9 248 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 TAF4BQ92750 862 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 HAVCR1Q96D42 359 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 ZNF416Q9BWM5 594 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 EHD1Q9H4M9 534 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 PDFQ9HBH1 243 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 HPF1Q9NWY4 346 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 OR1A1Q9P1Q5 309 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 MFHAS1Q9Y4C4 1052 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 COL16A1Q07092 1604 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-211ENST00000476215 PTCH1Q13635 1447 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 RAI1Q7Z5J4 1906 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-211ENST00000476215 SPHKAPQ2M3C7 1700 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 PLEKHH1Q9ULM0 1364 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 ASXL1Q8IXJ9 1541 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 SMIM28A0A1B0GU29 152 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 CLDN5O00501 218 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 FCN1O00602 326 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 TBL1XO60907 577 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 IFNB1P01574 187 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 CLUP10909 449 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 SERPINA2P20848 420 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 PSMA2P25787 234 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 STARP49675 285 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 OC90Q02509 493 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-211ENST00000476215 ACSM5Q6NUN0 579 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 LINC01561Q8N1V8 128 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 ZBTB44Q8NCP5 570 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 OR2L5Q8NG80 312 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 OR2A12Q8NGT7 310 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 LINC01006Q8NI28 216 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 C16orf74Q96GX8 76 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 OR5B2Q96R09 309 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 CNPY3Q9BT09 278 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 CRNKL1Q9BZJ0 848 aaKnown RBP3.49□□□□□ -1.85
PTCD3-211ENST00000476215 PPDPFQ9H3Y8 114 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 PTGES2Q9H7Z7 377 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 COQ10BQ9H8M1 238 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 CALHM2Q9HA72 323 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 FANCFQ9NPI8 374 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 ABCB10Q9NRK6 738 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 SMC3Q9UQE7 1217 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 USP16Q9Y5T5 823 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 YTHDC2Q9H6S0 1430 aaKnown RBP3.49□□□□□ -1.85
PTCD3-211ENST00000476215 XRN1Q8IZH2 1706 aaKnown RBP3.49□□□□□ -1.85
PTCD3-211ENST00000476215 RAB3GAP2Q9H2M9 1393 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 KIF1BO60333 1816 aa3.49□□□□□ -1.85
PTCD3-211ENST00000476215 CHD4Q14839 1912 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 TECPR2O15040 1411 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 PPIAL4CA0A0B4J2A2 164 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 OPN1LWP04000 364 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 IGF1P05019 195 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 PPIAL4GP0DN37 164 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 GCKP35557 465 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 RIPPLY3P57055 190 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 POLR2FP61218 127 aaKnown RBP3.48□□□□□ -1.85
PTCD3-211ENST00000476215 OTUD4Q01804 1114 aaKnown RBP3.48□□□□□ -1.85
PTCD3-211ENST00000476215 NDUFA9Q16795 377 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 APTXQ7Z2E3 356 aaKnown RBP3.48□□□□□ -1.85
PTCD3-211ENST00000476215 TMEM179BQ7Z7N9 219 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 ZNF573Q86YE8 665 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 FGGYQ96C11 551 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 NUS1Q96E22 293 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 IL4I1Q96RQ9 567 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 GPA33Q99795 319 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 THUMPD2Q9BTF0 503 aaKnown RBP3.48□□□□□ -1.85
PTCD3-211ENST00000476215 DUSP16Q9BY84 665 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 RIMS3Q9UJD0 308 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 KIF3AQ9Y496 699 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 MAB21L2Q9Y586 359 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 EP400Q96L91 3159 aa3.48□□□□□ -1.85
PTCD3-211ENST00000476215 BCL9LQ86UU0 1499 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 CDK12Q9NYV4 1490 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-211ENST00000476215 TDRD6O60522 2096 aaKnown RBP3.47□□□□□ -1.85
PTCD3-211ENST00000476215 PIK3C2GO75747 1445 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 SHPRHQ149N8 1683 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 ESYT2A0FGR8 921 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 B4DXG7 233 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 H3BMQ9 156 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 MAPK13O15264 365 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 LYPLA1O75608 230 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-211ENST00000476215 OR8U8P0C7N1 319 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 HTR2AP28223 471 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 MDH1P40925 334 aaKnown RBP3.47□□□□□ -1.85
PTCD3-211ENST00000476215 EFNA3P52797 238 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 CCDC57Q2TAC2 916 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 SULT1C3Q6IMI6 304 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 SCARA5Q6ZMJ2 495 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 HSD17B13Q7Z5P4 300 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-211ENST00000476215 FADS6Q8N9I5 356 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 ANKRD49Q8WVL7 239 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 NEIL2Q969S2 332 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 MARC2Q969Z3 335 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 MYLPFQ96A32 169 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 ZNF184Q99676 751 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-211ENST00000476215 SBNO1A3KN83 1393 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 PXDNQ92626 1479 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 NRXN1Q9ULB1 1477 aa3.47□□□□□ -1.85
PTCD3-211ENST00000476215 ATRNO75882 1429 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms