RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SLC16A6O15403 523 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 FADS1O60427 444 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 MPZL2O60487 215 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ADAP00813 363 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 C1QCP02747 245 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ALPLP05186 524 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 RNF224P0DH78 156 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 CYP4B1P13584 511 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ELAVL4P26378 380 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 COL8A1P27658 744 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ADH6P28332 368 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 OTX2P32243 289 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 PTGER1P34995 402 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 EIF1P41567 113 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 SLC1A3P43003 542 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 RFX3P48380 749 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 CLK1P49759 484 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ERFP50548 548 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 P2RX1P51575 399 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 MLF1P58340 268 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 PPP2R2BQ00005 443 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ALDH6A1Q02252 535 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 MERTKQ12866 999 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 CBFBQ13951 182 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 NTRK2Q16620 822 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 EIF2S3LQ2VIR3 472 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 GLYR1Q49A26 553 aaPredicted RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 NADK2Q4G0N4 442 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ENTPD8Q5MY95 495 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 PDZK1Q5T2W1 519 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 CCNJQ5T5M9 372 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 MRPL2Q5T653 305 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ABHD17BQ5VST6 288 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 SLC22A10Q63ZE4 541 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 LPCAT4Q643R3 524 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 KDM4DQ6B0I6 523 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 HMBOX1Q6NT76 420 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 RPL13AP3Q6NVV1 102 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 IZUMO2Q6UXV1 221 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 DEF8Q6ZN54 512 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF836Q6ZNA1 936 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 PLEKHM3Q6ZWE6 761 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 PPP1R32Q7Z5V6 425 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 TSPYL5Q86VY4 417 aaPredicted RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 DEPDC4Q8N2C3 294 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 PARP8Q8N3A8 854 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 CLIP4Q8N3C7 705 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 GALNT4Q8N4A0 578 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 FAM86B1Q8N7N1 296 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 SIMC1Q8NDZ2 872 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 SETD9Q8NE22 299 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 OR4N2Q8NGD1 307 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 OR6T1Q8NGN1 323 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 OR5W2Q8NH69 310 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 PHOSPHO1Q8TCT1 267 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 MAGEE2Q8TD90 523 aaPredicted RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 GNPDA2Q8TDQ7 276 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 NRG4Q8WWG1 115 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 TRUB1Q8WWH5 349 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ASB15Q8WXK1 588 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 SPACA9Q96E40 222 aaPredicted RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ARSGQ96EG1 525 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 SLC41A3Q96GZ6 507 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 NR1H4Q96RI1 486 aaPredicted RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 DGCR6LQ9BY27 220 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 PRRG3Q9BZD7 231 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 LHPPQ9H008 270 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ZBTB20Q9HC78 741 aaPredicted RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 STMN3Q9NZ72 180 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 KIF17Q9P2E2 1029 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 A4GNTQ9UNA3 340 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 POFUT2Q9Y2G5 429 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 C15orf41Q9Y2V0 281 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 MRPS18CQ9Y3D5 142 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 LYVE1Q9Y5Y7 322 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 CRYBG3Q68DQ2 2970 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ANKRD17O75179 2603 aaKnown RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 IGLV3-32A0A0A0MS00 114 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 IGHV3-20A0A0C4DH32 117 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 SH3PXD2BA1X283 911 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 SAC3D1A6NKF1 404 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 WWP2O00308 870 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 CHP2O43745 196 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 OR10H3O60404 316 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 CDC40O60508 579 aaKnown RBP eCLIP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 CLDN1O95832 211 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ANGPTL1O95841 491 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 IGKV1D-16P01601 117 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 PEX2P28328 305 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 EVI2BP34910 448 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 APOBEC1P41238 236 aaKnown RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ACAA2P42765 397 aaKnown RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 LIMS1P48059 325 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 CYB561P49447 251 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 CCL11P51671 97 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 CDH12P55289 794 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 DLX5P56178 289 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 RIPPLY3P57055 190 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 TOP3AQ13472 1001 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 PIN1Q13526 163 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms