RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ISXQ2M1V0 245 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ADPRMQ3LIE5 342 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 PARP15Q460N3 678 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF766Q5HY98 468 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 HAGHLQ6PII5 290 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 CATSPER3Q86XQ3 398 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SLC34A3Q8N130 599 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CCDC24Q8N4L8 307 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CERS5Q8N5B7 392 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CSNK1A1LQ8N752 337 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 C2CD4CQ8TF44 421 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 PIGCQ92535 297 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 RPL3LQ92901 407 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 ARSGQ96EG1 525 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 RAX2Q96IS3 184 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GPR20Q99678 358 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 THAP7Q9BT49 309 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 SYT11Q9BT88 431 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 DCUN1D5Q9BTE7 237 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 C1QTNF1Q9BXJ1 281 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SIK2Q9H0K1 926 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 DCSTAMPQ9H295 470 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GCM1Q9NP62 436 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 AKIP1Q9NQ31 210 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 MIEF1Q9NQG6 463 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SEMA4GQ9NTN9 838 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 FLVCR2Q9UPI3 526 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 RFNGQ9Y644 331 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TRAPPC8Q9Y2L5 1435 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CHD4Q14839 1912 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 POLR1AO95602 1720 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 A8MXK9 166 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 C9JVG2 144 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 M0QYT0 321 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 NARSO43776 548 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 PAGE4O60829 102 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 FADS2O95864 444 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 TFP02787 698 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 AKR1C4P17516 323 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CEBPBP17676 345 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 RAB3BP20337 219 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 MST1P26927 711 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GNRHRP30968 328 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 RRADP55042 308 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 MANFP55145 182 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 CDKN2DP55273 166 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 UBE2KP61086 200 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 LCN2P80188 198 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GK2Q14410 553 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 MROH9Q5TGP6 573 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ANKRD22Q5VYY1 191 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SPRYD7Q5W111 196 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CCDC144NLQ6NUI1 221 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CENPVQ7Z7K6 275 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 CMTM8Q8IZV2 173 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 OR51S1Q8NGJ8 323 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TMEM203Q969S6 136 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF775Q96BV0 537 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 HSFY1Q96LI6 401 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF778Q96MU6 729 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 DPH7Q9BTV6 452 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 MSTO1Q9BUK6 570 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 NRSN2Q9GZP1 204 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 WDR76Q9H967 626 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 NANOGQ9H9S0 305 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 C1GALT1Q9NS00 363 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 BEX4Q9NWD9 120 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 MCUBQ9NWR8 336 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SMPD4Q9NXE4 827 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 USP22Q9UPT9 525 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TEX14Q8IWB6 1497 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 NCANO14594 1321 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZMYM6O95789 1325 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 C19orf67A6NJJ6 358 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 CLDN25C9JDP6 229 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 HHLA1C9JL84 531 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 TSTD3H0UI37 97 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 H3BMQ9 156 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 NFIBO00712 420 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 KCNK3O14649 394 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 CCL25O15444 150 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 NBR2O15453 112 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 RAD51CO43502 376 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 XRCC2O43543 280 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 PCDH7O60245 1069 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 STBD1O95210 358 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 ZBTB7AO95365 584 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 CD74P04233 296 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 C8GP07360 202 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 OR8U9P0C7N5 309 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 CPN1P15169 458 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 CSF2RBP32927 897 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 NR0B1P51843 470 aaKnown RBP3.21□□□□□ -1.9
UBR3-208ENST00000474426 WNT4P56705 351 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 DYNLL1P63167 89 aaKnown RBP3.21□□□□□ -1.9
UBR3-208ENST00000474426 HMGCS1Q01581 520 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 SRSF6Q13247 344 aaKnown RBP3.21□□□□□ -1.9
UBR3-208ENST00000474426 PCOLCEQ15113 449 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 RBBP7Q16576 425 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 ITPRIPL2Q3MIP1 535 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms