RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 OR10Q1Q8NGQ4 319 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 ZPLD1Q8TCW7 415 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 SSC4DQ8WTU2 575 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 PHF10Q8WUB8 498 aaKnown RBP11.2□□□□□ -0.62
DDX56-209ENST00000473924 NSL1Q96IY1 281 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 DMRTA2Q96SC8 542 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 TUBA1CQ9BQE3 449 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 TTYH2Q9BSA4 534 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 PINK1Q9BXM7 581 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 TMEM185BQ9H7F4 350 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 SPAG4Q9NPE6 437 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 ACER3Q9NUN7 267 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 NDE1Q9NXR1 346 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 ADA2Q9NZK5 511 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 USP22Q9UPT9 525 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 FAM215AQ9Y5M1 114 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 FASNP49327 2511 aaKnown RBP11.2□□□□□ -0.62
DDX56-209ENST00000473924 GJE1A6NN92 205 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 CLCA1A8K7I4 914 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 H0YC42 278 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 FAAHO00519 579 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 NME4O00746 187 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 FRS3O43559 492 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 TPST1O60507 370 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 ADAM11O75078 769 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 EPPINO95925 133 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 LDLRP01130 860 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 IFNA14P01570 189 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 IL11P20809 199 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 PSMA4P25789 261 aaKnown RBP11.19□□□□□ -0.62
DDX56-209ENST00000473924 SFTPDP35247 375 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 APOBEC1P41238 236 aaKnown RBP11.19□□□□□ -0.62
DDX56-209ENST00000473924 EIF1AXP47813 144 aaKnown RBP11.19□□□□□ -0.62
DDX56-209ENST00000473924 SUCLG1P53597 346 aaKnown RBP11.19□□□□□ -0.62
DDX56-209ENST00000473924 TPD52P55327 224 aaPredicted RBP11.19□□□□□ -0.62
DDX56-209ENST00000473924 CLDN20P56880 219 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 NUP107P57740 925 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 NCALDP61601 193 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 DMTNQ08495 405 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 SELENBP1Q13228 472 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 PDSS1Q5T2R2 415 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 RTL6Q6ICC9 239 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 PPP4R4Q6NUP7 873 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 C3orf33Q6P1S2 294 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 C8orf82Q6P1X6 216 aaPredicted RBP11.19□□□□□ -0.62
DDX56-209ENST00000473924 C16orf89Q6UX73 402 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 PLEKHM3Q6ZWE6 761 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 GRINAQ7Z429 371 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 LACC1Q8IV20 430 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 CADM2Q8N3J6 435 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 RASSF5Q8WWW0 418 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 RND1Q92730 232 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 SLC35B4Q969S0 331 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 ZNF524Q96C55 264 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 KCTD14Q9BQ13 255 aaPredicted RBP11.19□□□□□ -0.62
DDX56-209ENST00000473924 ALG2Q9H553 416 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 COQ3Q9NZJ6 369 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 CHST2Q9Y4C5 530 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 SPIN1Q9Y657 262 aaPredicted RBP11.19□□□□□ -0.62
DDX56-209ENST00000473924 HEATR5AQ86XA9 2040 aa11.19□□□□□ -0.62
DDX56-209ENST00000473924 MED12Q93074 2177 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 TENM4Q6N022 2769 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 CLEC18AA5D8T8 446 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 CD8B2A6NJW9 211 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 ETV2O00321 342 aaPredicted RBP11.18□□□□□ -0.62
DDX56-209ENST00000473924 GCM2O75603 506 aaPredicted RBP11.18□□□□□ -0.62
DDX56-209ENST00000473924 NTN1O95631 604 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 GLI4P10075 376 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 PRG2P13727 222 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 CALB2P22676 271 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 SLC7A1P30825 629 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 ACAA2P42765 397 aaKnown RBP11.18□□□□□ -0.62
DDX56-209ENST00000473924 SLC1A3P43003 542 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 HTR3AP46098 478 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 GSK3BP49841 420 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 POLR2HP52434 150 aaKnown RBP11.18□□□□□ -0.62
DDX56-209ENST00000473924 CLDN15P56746 228 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 RGS8P57771 180 aaPredicted RBP11.18□□□□□ -0.62
DDX56-209ENST00000473924 SLC25A3Q00325 362 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 HOXC5Q00444 222 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 DUSP7Q16829 419 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 TMEM176BQ3YBM2 270 aaPredicted RBP11.18□□□□□ -0.62
DDX56-209ENST00000473924 GLIPR1L2Q4G1C9 344 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 LRRC23Q53EV4 343 aaPredicted RBP11.18□□□□□ -0.62
DDX56-209ENST00000473924 NSUN5P2Q63ZY6 315 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 CLEC18BQ6UXF7 455 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 ESPNLQ6ZVH7 1005 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 CCDC80Q76M96 950 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 TRPM8Q7Z2W7 1104 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 P4HA3Q7Z4N8 544 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 MRGPRGQ86SM5 289 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 GGNQ86UU5 652 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 PGAM4Q8N0Y7 254 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 MARVELD2Q8N4S9 558 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 CLEC18CQ8NCF0 446 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 TNIP2Q8NFZ5 429 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 FIG4Q92562 907 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 KLHL15Q96M94 604 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 EVA1AQ9H8M9 152 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms