RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 CLK1P49759 484 aaKnown RBP11.35□□□□□ -0.59
C9orf85-204ENST00000473252 CCR4P51679 360 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 MVDP53602 400 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 CRISP3P54108 245 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 RAC3P60763 192 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 FADDQ13158 208 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 TOMM34Q15785 309 aaPredicted RBP11.35□□□□□ -0.59
C9orf85-204ENST00000473252 MAPK14Q16539 360 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 SYPL1Q16563 259 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 PRAMEF8Q5VWM4 474 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 PRAMEF7Q5VXH5 474 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 VWA1Q6PCB0 445 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 BLOC1S3Q6QNY0 202 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 PLXDC2Q6UX71 529 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 BTLAQ7Z6A9 289 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 TMEM200AQ86VY9 491 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 PEX5LQ8IYB4 626 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 ZZZ3Q8IYH5 903 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 SLC43A2Q8N370 569 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 ARFGAP2Q8N6H7 521 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 OR9I1Q8NGQ6 314 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 RFWD2Q8NHY2 731 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 GTF2H4Q92759 462 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 MARK4Q96L34 752 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 KLHDC3Q9BQ90 382 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 EBF4Q9BQW3 602 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 RASSF1Q9NS23 344 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 ACER3Q9NUN7 267 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 MRGBPQ9NV56 204 aa11.35□□□□□ -0.59
C9orf85-204ENST00000473252 A0A096LPI6 279 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 CENPVL1A0A0U1RR11 272 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 CYP7B1O75881 506 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 SMNDC1O75940 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
C9orf85-204ENST00000473252 TFPTP0C1Z6 253 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 BMP2P12643 396 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 UQCRBP14927 111 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 PPIBP23284 216 aaKnown RBP11.34□□□□□ -0.59
C9orf85-204ENST00000473252 SLC7A1P30825 629 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 SFTPDP35247 375 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 CRATP43155 626 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 CTBP2P56545 445 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 SESN3P58005 492 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 KRTAP10-9P60411 292 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 DSTNP60981 165 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 SQLEQ14534 574 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 ZNF239Q16600 458 aaKnown RBP11.34□□□□□ -0.59
C9orf85-204ENST00000473252 NDUFAF6Q330K2 333 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 TMEM176BQ3YBM2 270 aaPredicted RBP11.34□□□□□ -0.59
C9orf85-204ENST00000473252 TIGD2Q4W5G0 525 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 COX20Q5RI15 118 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 C6orf10Q5SRN2 563 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 LRIF1Q5T3J3 769 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 GRINAQ7Z429 371 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 ZNF440Q8IYI8 595 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 ANKFN1Q8N957 763 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 ZNF563Q8TA94 476 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 RNF128Q8TEB7 428 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 WDR60Q8WVS4 1066 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 NINJ1Q92982 152 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 ZG16BQ96DA0 208 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 SPDL1Q96EA4 605 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 POLDIP3Q9BY77 421 aaKnown RBP11.34□□□□□ -0.59
C9orf85-204ENST00000473252 PAIP1Q9H074 479 aaKnown RBP11.34□□□□□ -0.59
C9orf85-204ENST00000473252 OR10A4Q9H209 315 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 ARMC7Q9H6L4 198 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
C9orf85-204ENST00000473252 TRIM33Q9UPN9 1127 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 PCDHB14Q9Y5E9 798 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 DSPPQ9NZW4 1301 aa11.34□□□□□ -0.59
C9orf85-204ENST00000473252 UQCRHLA0A096LP55 91 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 A0A0G2JPF8 293 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 SH3D21A4FU49 640 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 HNRNPCL2B2RXH8 293 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 HNRNPCL3B7ZW38 293 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 CLIC1O00299 241 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 CASKO14936 926 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 DNPH1O43598 174 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 HNRNPCL1O60812 293 aaKnown RBP11.33□□□□□ -0.6
C9orf85-204ENST00000473252 EDF1O60869 148 aaKnown RBP11.33□□□□□ -0.6
C9orf85-204ENST00000473252 SASH3O75995 380 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 PRKD3O94806 890 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 THBS1P07996 1170 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 CHRM4P08173 479 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 HNRNPCL4P0DMR1 293 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 POU2F1P14859 743 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 PPP3CBP16298 524 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 CSNK2A1P68400 391 aaPredicted RBP11.33□□□□□ -0.6
C9orf85-204ENST00000473252 SIRPAP78324 504 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 RGNQ15493 299 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 TMEM201Q5SNT2 666 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 METTL21CQ5VZV1 264 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 ZNF474Q6S9Z5 364 aaPredicted RBP11.33□□□□□ -0.6
C9orf85-204ENST00000473252 BEND4Q6ZU67 534 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 CDH24Q86UP0 819 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 STK32CQ86UX6 486 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 FUNDC1Q8IVP5 155 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 PNPT1Q8TCS8 783 aaKnown RBP11.33□□□□□ -0.6
C9orf85-204ENST00000473252 TSPEARQ8WU66 669 aa11.33□□□□□ -0.6
C9orf85-204ENST00000473252 SLC35B4Q969S0 331 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms