RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 EIF1P41567 113 aaKnown RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 SERPINB9P50453 376 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 ZNF83P51522 516 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 RAC3P60763 192 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 IQCCQ4KMZ1 466 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 SLC25A53Q5H9E4 307 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 OLIG3Q7RTU3 272 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 MUC15Q8N387 334 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 C17orf53Q8N3J3 647 aaPredicted RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 WDR31Q8NA23 367 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 OR6Y1Q8NGX8 325 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 OR52N5Q8NH56 324 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 OR2W6PQ8NHA6 318 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 CLHC1Q8NHS4 586 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 FAM76AQ8TAV0 307 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 PHOSPHO1Q8TCT1 267 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 ZFAND2BQ8WV99 257 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 CDS1Q92903 461 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 GCDHQ92947 438 aaPredicted RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 MUCL1Q96DR8 90 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 FAM120BQ96EK7 910 aaKnown RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 RADILQ96JH8 1075 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 FCRL1Q96LA6 429 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 PIMREGQ9BSJ6 248 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 QRSL1Q9H0R6 528 aaKnown RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 WBP11Q9Y2W2 641 aaKnown RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 ACTL7BQ9Y614 415 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 PMF1-BGLAPU3KQ54 211 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 A0A0A6YYJ9 748 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 IGHV4-61A0A0C4DH41 118 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 CENPVL1A0A0U1RR11 272 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 ZNF716A6NP11 495 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 ZNF724A8MTY0 619 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 SLCO1B7G3V0H7 640 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 H7C417 338 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 SCDO00767 359 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 PDPK1O15530 556 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 TBX19O60806 448 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 SEC22BO75396 215 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 RAD51DO75771 328 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 HMGN2P05204 90 aaKnown RBP8.17□□□□□ -1.1
VCL-204ENST00000472585 SNRPAP09012 282 aaKnown RBP8.17□□□□□ -1.1
VCL-204ENST00000472585 GGT1P19440 569 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 TAC1P20366 129 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 GPC1P35052 558 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 PDLIM4P50479 330 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 FABP6P51161 128 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 P2RX1P51575 399 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 EFNA4P52798 201 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 SLC25A3Q00325 362 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 DEFA6Q01524 100 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 CHRNEQ04844 493 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 CHRNB3Q05901 458 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 RASGEF1BQ0VAM2 473 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 PDE7AQ13946 482 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 RFTN2Q52LD8 501 aaPredicted RBP8.17□□□□□ -1.1
VCL-204ENST00000472585 CLEC6AQ6EIG7 209 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 SLC22A25Q6T423 547 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 IKBIPQ70UQ0 350 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 SLC43A2Q8N370 569 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 MMGT1Q8N4V1 131 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 CEP70Q8NHQ1 597 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 MZB1Q8WU39 189 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 ZNF764Q96H86 408 aaPredicted RBP8.17□□□□□ -1.1
VCL-204ENST00000472585 MS4A4EQ96PG1 132 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 BTBD2Q9BX70 525 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 TUBB1Q9H4B7 451 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 REEP4Q9H6H4 257 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 TIGARQ9NQ88 270 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 MGAT4BQ9UQ53 548 aa8.17□□□□□ -1.1
VCL-204ENST00000472585 PDLIM1O00151 329 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 NDUFS8O00217 210 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 DNAJA2O60884 412 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 BCAS1O75363 584 aaPredicted RBP8.16□□□□□ -1.1
VCL-204ENST00000472585 RSL1D1O76021 490 aaKnown RBP8.16□□□□□ -1.1
VCL-204ENST00000472585 ITGA5P08648 1049 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 ALOX5P09917 674 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 SDC1P18827 310 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 PRPH2P23942 346 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 LCN1P31025 176 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 NR4A2P43354 598 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 COMPP49747 757 aaPredicted RBP8.16□□□□□ -1.1
VCL-204ENST00000472585 POU6F2P78424 691 aaPredicted RBP8.16□□□□□ -1.1
VCL-204ENST00000472585 QPRTQ15274 297 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 GABRA6Q16445 453 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 CARTPTQ16568 116 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 SWI5Q1ZZU3 235 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 VPS26BQ4G0F5 336 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 ARL13AQ5H913 290 aaPredicted RBP8.16□□□□□ -1.1
VCL-204ENST00000472585 FBXW9Q5XUX1 488 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 SSX8Q7RTT4 187 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 GALNT5Q7Z7M9 940 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 P2RY8Q86VZ1 359 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 MISPQ8IVT2 679 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 CCNYL1Q8N7R7 359 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 COX18Q8N8Q8 333 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 ZNF527Q8NB42 609 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 MUS81Q96NY9 551 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms