RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	NDP	Q00604	133 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	ZNF45	Q02386	682 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	CHRNB3	Q05901	458 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	SLC10A7	Q0GE19	358 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	SPATA46	Q5T0L3	261 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	ATAD3B	Q5T9A4	648 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	PPP1R42	Q7Z4L9	355 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	SH2D6	Q7Z4S9	175 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	TMEM110	Q86TL2	294 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	LCA5	Q86VQ0	697 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	C11orf53	Q8IXP5	236 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	PRR22	Q8IZ63	422 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	STEAP2	Q8NFT2	490 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	STXBP6	Q8NFX7	210 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	OR5L2	Q8NGL0	311 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	TRMT10A	Q8TBZ6	339 aa	Known RBP	2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	TCTEX1D2	Q8WW35	142 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	MRPS31	Q92665	395 aa	Known RBP	2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	EMG1	Q92979	244 aa	Known RBP	2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	NEIL2	Q969S2	332 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	TGM7	Q96PF1	710 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	ZNF607	Q96SK3	696 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	CNPY3	Q9BT09	278 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	RNF126	Q9BV68	326 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	TEX13B	Q9BXU2	312 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	RHBG	Q9H310	441 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	SNX6	Q9UNH7	406 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	MRPS33	Q9Y291	106 aa	Known RBP	2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	ZNF256	Q9Y2P7	627 aa	Predicted RBP	2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	PLLP	Q9Y342	182 aa		2.7	□□□□□ -1.98
PTCD3-209	ENST00000472044	CPLX1	O14810	134 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	PRKY	O43930	277 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	GNA14	O95837	355 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	UGT2B4	P06133	528 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	HNF1A	P20823	631 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	OR3A4P	P47883	348 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	PRKX	P51817	358 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	SPIB	Q01892	262 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	GANAB	Q14697	944 aa	Known RBP	2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	ZNF79	Q15937	498 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	KYAT1	Q16773	422 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	SLC25A52	Q3SY17	297 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	EOGT	Q5NDL2	527 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	ZNF544	Q6NX49	715 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	SCARA5	Q6ZMJ2	495 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	SLC38A6	Q8IZM9	456 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	ARL6IP6	Q8N6S5	226 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	FAM133A	Q8N9E0	248 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	BBS1	Q8NFJ9	593 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	IPMK	Q8NFU5	416 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	OR10H4	Q8NGA5	316 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	OR51G2	Q8NGK0	314 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	OR4D5	Q8NGN0	318 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	OR9A1P	Q8NGU1	263 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	OR1F12	Q8NHA8	337 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	LINC01006	Q8NI28	216 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	PAQR8	Q8TEZ7	354 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	PELI1	Q96FA3	418 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	PHYHIPL	Q96FC7	376 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	C16orf74	Q96GX8	76 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	TECTB	Q96PL2	329 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	CCNL2	Q96S94	520 aa	Predicted RBP	2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	TXN2	Q99757	166 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	ZSCAN5A	Q9BUG6	496 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	NXF5	Q9H1B4	397 aa	Known RBP	2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	AATF	Q9NY61	560 aa	Known RBP eCLIP	2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	IL17C	Q9P0M4	197 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	PCSK1N	Q9UHG2	260 aa		2.69	□□□□□ -1.98
PTCD3-209	ENST00000472044	TUBAL3	A6NHL2	446 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044		K7N7A8	449 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	HCRTR1	O43613	425 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	CXCL13	O43927	109 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	TIMP1	P01033	207 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	MMP11	P24347	488 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	HOXD10	P28358	340 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	LAP3	P28838	519 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	AQP1	P29972	269 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	YWHAB	P31946	246 aa	Known RBP	2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	IFNAR2	P48551	515 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	TDO2	P48775	406 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	HSPA2	P54652	639 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	CUL1	Q13616	776 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	ANKDD1A	Q495B1	522 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	TP53I3	Q53FA7	332 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	CFAP157	Q5JU67	520 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	BEND3	Q5T5X7	828 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	ATF7IP2	Q5U623	682 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	TMEM225	Q6GV28	225 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	CCDC137	Q6PK04	289 aa	Known RBP	2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	TMEM179B	Q7Z7N9	219 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	ZNF589	Q86UQ0	364 aa	Predicted RBP	2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	CLEC4F	Q8N1N0	589 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	MTURN	Q8N3F0	131 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	CATSPER1	Q8NEC5	780 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	ANKRD49	Q8WVL7	239 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	PIGC	Q92535	297 aa		2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	FRAT1	Q92837	279 aa	Predicted RBP	2.68	□□□□□ -1.98
PTCD3-209	ENST00000472044	MS4A14	Q96JA4	679 aa		2.68	□□□□□ -1.98

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