RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 HPS4Q9NQG7 708 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 DNAJC17Q9NVM6 304 aaKnown RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 ELOVL2Q9NXB9 296 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 TRPC4Q9UBN4 977 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 MTRF1LQ9UGC7 380 aaKnown RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 BAIAP2L1Q9UHR4 511 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 PILRBQ9UKJ0 227 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CLEC4EQ9ULY5 219 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 SNX7Q9UNH6 387 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 PLA2G4CQ9UP65 541 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 HS3ST2Q9Y278 367 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 LIPGQ9Y5X9 500 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 IKBKGQ9Y6K9 419 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 V9GYY5 206 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 SZT2Q5T011 3432 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 PRUNE2Q8WUY3 3088 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 A0A1W2PNU3 283 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 MAGEB16A2A368 324 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 LOC730098B7Z3J9 87 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 CCL24O00175 119 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 EIF3HO15372 352 aaKnown RBP eCLIP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 AP2A1O95782 977 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 CD160O95971 181 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 APODP05090 189 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 HLA-DQB2P05538 268 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 APRTP07741 180 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 YES1P07947 543 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 SERPINF2P08697 491 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 MLNP12872 115 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 CD59P13987 128 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 PSMB4P28070 264 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 OPRD1P41143 372 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 TNFRSF4P43489 277 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 NPY2RP49146 381 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 SERPINH1P50454 418 aaKnown RBP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 RHOAP61586 193 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 ST8SIA6P61647 398 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 VSNL1P62760 191 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 BASP1P80723 227 aaKnown RBP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 RAD51Q06609 339 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 NPRL3Q12980 569 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 KIAA0141Q14154 515 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 KCNJ11Q14654 390 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 LASP1Q14847 261 aaKnown RBP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 TRADDQ15628 312 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 FAM106AQ4KMX7 169 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 ZRANB3Q5FWF4 1079 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 KCTD11Q693B1 232 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 EMBQ6PCB8 327 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 PRUNE1Q86TP1 453 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 RALGPS2Q86X27 583 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 CLYBLQ8N0X4 340 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 PDIK1LQ8N165 341 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 OR4C15Q8NGM1 316 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 FBXO25Q8TCJ0 367 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 PRCCQ92733 491 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 DNASE1L2Q92874 299 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 TADA1Q96BN2 335 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 LRRC39Q96DD0 335 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 IMP4Q96G21 291 aaKnown RBP4.28□□□□□ -1.72
CCDC39-202ENST00000471307 MSANTD3Q96H12 275 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 FMO2Q99518 471 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 JPT2Q9H910 190 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 RNF121Q9H920 327 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 LRRC40Q9H9A6 602 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 NT5MQ9NPB1 228 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 IL19Q9UHD0 177 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 FAM153AQ9UHL3 310 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 RSPH14Q9UHP6 348 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 SH3BGRL2Q9UJC5 107 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 ERVW-1Q9UQF0 538 aa4.28□□□□□ -1.72
CCDC39-202ENST00000471307 MIA3Q5JRA6 1907 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 A0A087WV48 116 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 A0A087WZ39 114 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 hCG_38984A0A1B0GV85 526 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 LOC285095A0A1B0GVY8 99 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 A0A1W2PQ67 120 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 SDR42E2A6NKP2 422 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 C17orf105B2RV13 164 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 E7ESA3 106 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 SPECC1L-ADORA2AF8WAN1 911 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 PHOX2AO14813 284 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 ALOX15BO15296 676 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 SAP30O75446 220 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 CRCPO75575 148 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 GUCA1CO95843 209 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 SLC4A1P02730 911 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 GBAP04062 536 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 H2AFXP16104 143 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-202ENST00000471307 GPR183P32249 361 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 ADRA1AP35348 466 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 MAXP61244 160 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 RPL26P61254 145 aaKnown RBP4.27□□□□□ -1.73
CCDC39-202ENST00000471307 AP1S1P61966 158 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 CDH17Q12864 832 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 RBBP7Q16576 425 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 DUSP5Q16690 384 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 CARD16Q5EG05 197 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 SHEQ5VZ18 495 aa4.27□□□□□ -1.73
CCDC39-202ENST00000471307 TMEM215Q68D42 235 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms