RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 OR52N2Q8NGI0 321 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 OR6F1Q8NGZ6 308 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 FGGYQ96C11 551 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 LGALS12Q96DT0 336 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 THOC3Q96J01 351 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 IL17FQ96PD4 163 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 C20orf24Q9BUV8 137 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 MINDY3Q9H8M7 445 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 RDH14Q9HBH5 336 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 CHRNA9Q9UGM1 479 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 APOBEC3BQ9UH17 382 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 RGPD1P0DJD0 1748 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 A6NIZ1 184 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 C2CD4BA6NLJ0 364 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ZFP92A6NM28 416 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 NCBP2LA6PVI3 153 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 TK1P04183 234 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 SMIM17P0DL12 118 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 MTHFD2P13995 350 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 GLB1P16278 677 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 MTNR1AP48039 350 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 PSMB3P49720 205 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ELLP55199 621 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 EDDM3BP56851 147 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 RAP1BP61224 184 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 RAP1AP62834 184 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 RPS21P63220 83 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 TPGS2Q68CL5 300 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 TRNP1Q6NT89 227 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 CATSPERDQ86XM0 798 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 OR5D14Q8NGL3 314 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 RHEBL1Q8TAI7 183 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 HAS1Q92839 578 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 NKD2Q969F2 451 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ALG12Q9BV10 488 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 NUDT9Q9BW91 350 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 EGLN3Q9H6Z9 239 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 NT5DC2Q9H857 520 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ZDHHC11Q9H8X9 412 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 NOX3Q9HBY0 568 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 GAR1Q9NY12 217 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 CXorf49A8MYA2 514 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 LATO43561 262 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 SOCS5O75159 536 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 OR13C7P0DN81 318 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 FOXN2P32314 431 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 WDR4P57081 412 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 MFGE8Q08431 387 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 PPP1R3AQ16821 1122 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 PAGE3Q5JUK9 113 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 MS4A15Q8N5U1 240 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF420Q8TAQ5 688 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 SECTM1Q8WVN6 248 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 LMF2Q9BU23 707 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 PLK3Q9H4B4 646 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 NIPAL2Q9H841 368 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 LMO7Q8WWI1 1683 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 LGALS8O00214 317 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 BCAS2O75934 225 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 RASAL1O95294 804 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 AADACP22760 399 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 MC3RP41968 323 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 LILRA4P59901 499 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 CXADRP78310 365 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 SIM1P81133 766 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 OLIG2Q13516 323 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 SNTB1Q13884 538 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 UNC50Q53HI1 259 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 C18orf63Q68DL7 685 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 FBXL22Q6P050 247 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 SHISA6Q6ZSJ9 500 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 TPRG1Q6ZUI0 275 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 TEX26Q8N6G2 289 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ADAMTS19Q8TE59 1207 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ZC3HAV1LQ96H79 300 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 NOL4LQ96MY1 436 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 GPR22Q99680 433 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ACOT13Q9NPJ3 140 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 PLSCR3Q9NRY6 295 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 DZANK1Q9NVP4 752 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 EXO1Q9UQ84 846 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 TCRBV7S3A2A0A539 114 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 A6NIN4 97 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 LEFTY2O00292 366 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 RDH16O75452 317 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 C1GALT1C1LP0DN25 315 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 SLC1A3P43003 542 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 KCNQ1P51787 676 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 OR52E8Q6IFG1 317 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 TMPRSS11FQ6ZWK6 438 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 NOXA1Q86UR1 476 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 OR1S2Q8NGQ3 325 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 OR10R2Q8NGX6 335 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 SLC7A13Q8TCU3 470 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 BLNKQ8WV28 456 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 THAP7Q9BT49 309 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 TTYH3Q9C0H2 523 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms