RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SEM1Q6ZVN7 128 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 SZRD1Q7Z422 152 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 CAMKMTQ7Z624 323 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 LACC1Q8IV20 430 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 TRIML2Q8N7C3 387 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 FADS6Q8N9I5 356 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 GPR151Q8TDV0 419 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 OR5P2Q8WZ92 322 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 FAM120BQ96EK7 910 aaKnown RBP13.12□□□□□ -0.31
COL27A1-203ENST00000468565 CPPED1Q9BRF8 314 aaPredicted RBP13.12□□□□□ -0.31
COL27A1-203ENST00000468565 BHLHE41Q9C0J9 482 aaPredicted RBP13.12□□□□□ -0.31
COL27A1-203ENST00000468565 VCX3AQ9NNX9 186 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 PPP4R1LQ9P1A2 415 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 FBXL2Q9UKC9 423 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 CAMK2AQ9UQM7 478 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 TEX15Q9BXT5 2789 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 MED12LQ86YW9 2145 aa13.12□□□□□ -0.31
COL27A1-203ENST00000468565 GXYLT2A0PJZ3 443 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 HSPB2A8KAH6 182 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 SCO2O43819 266 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 MT-ND1P03886 318 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 ACP2P11117 423 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 PRF1P14222 555 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 CPN1P15169 458 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 CAPGP40121 348 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 GFRA1P56159 465 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 TUBA4AP68366 448 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 HSPB2Q16082 182 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 KCTD21Q4G0X4 260 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 DCST1Q5T197 706 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 TTC33Q6PID6 262 aaPredicted RBP13.11□□□□□ -0.31
COL27A1-203ENST00000468565 ENPP6Q6UWR7 440 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 GDF7Q7Z4P5 450 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 OR4K17Q8NGC6 315 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 CYGBQ8WWM9 190 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 PIK3R3Q92569 461 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 HHATLQ9HCP6 504 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 NEUROD4Q9HD90 331 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 ZCCHC3Q9NUD5 404 aaKnown RBP13.11□□□□□ -0.31
COL27A1-203ENST00000468565 GIN1Q9NXP7 522 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 TAS2R10Q9NYW0 307 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 FLRT3Q9NZU0 649 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 DKKL1Q9UK85 242 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 PCDHB14Q9Y5E9 798 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 NKX2-6A6NCS4 301 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 CD8B2A6NJW9 211 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 B4DXG7 233 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 IGKV1D-16P01601 117 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 IGFBP2P18065 325 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 EFNA1P20827 205 aaPredicted RBP13.11□□□□□ -0.31
COL27A1-203ENST00000468565 MSX1P28360 303 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 LCN1P31025 176 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 TIMP3P35625 211 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 DSCR4P56555 118 aaPredicted RBP13.11□□□□□ -0.31
COL27A1-203ENST00000468565 GANABQ14697 944 aaKnown RBP13.11□□□□□ -0.31
COL27A1-203ENST00000468565 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL27A1-203ENST00000468565 SLC25A35Q3KQZ1 300 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 NSUN5P2Q63ZY6 315 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 OR5M10Q6IEU7 315 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 METTL25Q8N6Q8 603 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 ZPLD1Q8TCW7 415 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 MAGEE2Q8TD90 523 aaPredicted RBP13.11□□□□□ -0.31
COL27A1-203ENST00000468565 SLC9A6Q92581 669 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 MOAP1Q96BY2 351 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 SLC47A1Q96FL8 570 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 STACQ99469 402 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 UCK2Q9BZX2 261 aa13.11□□□□□ -0.31
COL27A1-203ENST00000468565 KAT8Q9H7Z6 458 aaKnown RBP13.11□□□□□ -0.31
COL27A1-203ENST00000468565 CCDC160A6NGH7 325 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 PRSS23O95084 383 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 UTS2O95399 124 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 NGFRP08138 427 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 ALOX5P09917 674 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 CHMP24386 653 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 DPP4P27487 766 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 CEACAM8P31997 349 aaPredicted RBP13.1□□□□□ -0.31
COL27A1-203ENST00000468565 RFX3P48380 749 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 PHC1P78364 1004 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 DUSP5Q16690 384 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 GTDC1Q4AE62 458 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 CALHM3Q86XJ0 350 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 SLC16A11Q8NCK7 471 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 OR2M3Q8NG83 312 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 OR56A1Q8NGH5 318 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 FBXO30Q8TB52 745 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 SFXN5Q8TD22 340 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 DUSP26Q9BV47 211 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 IKZF5Q9H5V7 419 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 MAGIXQ9H6Y5 334 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 DUSP22Q9NRW4 184 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 DNAJB9Q9UBS3 223 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
COL27A1-203ENST00000468565 IGLV3-32A0A0A0MS00 114 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 H0YAE9 185 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 RFXANKO14593 260 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 C6orf47O95873 294 aa13.09□□□□□ -0.31
COL27A1-203ENST00000468565 HMGN2P05204 90 aaKnown RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 CCT3P49368 545 aaKnown RBP13.09□□□□□ -0.31
COL27A1-203ENST00000468565 MEX3BQ6ZN04 569 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms