RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 CECR9P0C854 216 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 IGHV4-38-2P0DP08 117 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 GP5P40197 560 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 PIK3CGP48736 1102 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 CDK16Q00536 496 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 SLC18A2Q05940 514 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 DBPQ10586 325 aaPredicted RBP10.74□□□□□ -0.69
UBR4-210ENST00000466969 ZNF155Q12901 538 aaPredicted RBP10.74□□□□□ -0.69
UBR4-210ENST00000466969 FOXF1Q12946 379 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 TSNQ15631 228 aaKnown RBP10.74□□□□□ -0.69
UBR4-210ENST00000466969 APOOLQ6UXV4 268 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 SAMD14Q8IZD0 417 aaPredicted RBP10.74□□□□□ -0.69
UBR4-210ENST00000466969 TMEM86BQ8N661 226 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 ERP27Q96DN0 273 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 GAL3ST1Q99999 423 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 FRMD8P1Q9BZ68 369 aaPredicted RBP10.74□□□□□ -0.69
UBR4-210ENST00000466969 PALMDQ9NP74 551 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 PFDN4Q9NQP4 134 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 SLC7A10Q9NS82 523 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 SIRT3Q9NTG7 399 aaPredicted RBP10.74□□□□□ -0.69
UBR4-210ENST00000466969 CTNNAL1Q9UBT7 734 aa10.74□□□□□ -0.69
UBR4-210ENST00000466969 TCRBV7S2A1N4TA0A589 114 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 H0YL77 283 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 CDC14BO60729 498 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 EVX1P49640 407 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 PSG6Q00889 435 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 CDK5R2Q13319 367 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 CUL3Q13618 768 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 E2F2Q14209 437 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 TGFBIQ15582 683 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 DEFB112Q30KQ8 113 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 HIKESHIQ53FT3 197 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 ZNF771Q7L3S4 317 aaPredicted RBP10.73□□□□□ -0.69
UBR4-210ENST00000466969 CNTN4Q8IWV2 1026 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 ZNF675Q8TD23 568 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 DYRK2Q92630 601 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 TRIM44Q96DX7 344 aaPredicted RBP10.73□□□□□ -0.69
UBR4-210ENST00000466969 TIMD4Q96H15 378 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 SH3YL1Q96HL8 342 aaPredicted RBP10.73□□□□□ -0.69
UBR4-210ENST00000466969 DENND2DQ9H6A0 471 aaPredicted RBP10.73□□□□□ -0.69
UBR4-210ENST00000466969 NHEJ1Q9H9Q4 299 aaPredicted RBP10.73□□□□□ -0.69
UBR4-210ENST00000466969 MMP26Q9NRE1 261 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 LEF1Q9UJU2 399 aaPredicted RBP10.73□□□□□ -0.69
UBR4-210ENST00000466969 CES1P1Q9UKY3 287 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 VWA7Q9Y334 891 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 WIPI2Q9Y4P8 454 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 PCDHA9Q9Y5H5 950 aa10.73□□□□□ -0.69
UBR4-210ENST00000466969 IGKV3D-15A0A087WSY6 115 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 SMTNL1A8MU46 457 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 CXorf49A8MYA2 514 aaPredicted RBP10.72□□□□□ -0.69
UBR4-210ENST00000466969 GPR171O14626 319 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 EFNA2O43921 213 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 GUCY1B2O75343 617 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 NCR1O76036 304 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 AHSGP02765 367 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 LINGO3P0C6S8 592 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 ZNF37AP17032 561 aaPredicted RBP10.72□□□□□ -0.69
UBR4-210ENST00000466969 EPORP19235 508 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 GABRB3P28472 473 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 MPGP29372 298 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 ALDH3B1P43353 468 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 UBE2NP61088 152 aaKnown RBP10.72□□□□□ -0.69
UBR4-210ENST00000466969 PDK3Q15120 406 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 TRIP13Q15645 432 aaPredicted RBP10.72□□□□□ -0.69
UBR4-210ENST00000466969 GRAMD1BQ3KR37 738 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 C3orf36Q3SXR2 165 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 GRHL2Q6ISB3 625 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 FAM45BPQ6NSW5 357 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 FAM180BQ6P0A1 224 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 C4orf22Q6V702 233 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 MYLK4Q86YV6 388 aaPredicted RBP10.72□□□□□ -0.69
UBR4-210ENST00000466969 TXLNBQ8N3L3 684 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 GATSQ8NAP1 163 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 OR4S1Q8NGB4 309 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 FBXO27Q8NI29 283 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 FAM45AQ8TCE6 357 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 RAB1CQ92928 201 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 ZNF385DQ9H6B1 395 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 Q9N2J8 555 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 NOX4Q9NPH5 578 aa10.72□□□□□ -0.69
UBR4-210ENST00000466969 WI2-2373I1.2A0A1W2PRP0 233 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 ALG1L2C9J202 215 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 CLDN25C9JDP6 229 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 KLK1P06870 262 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 LTA4HP09960 611 aaKnown RBP10.71□□□□□ -0.69
UBR4-210ENST00000466969 SEC24CP53992 1094 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 SNTB2Q13425 540 aaKnown RBP10.71□□□□□ -0.69
UBR4-210ENST00000466969 DAG1Q14118 895 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 HERPUD1Q15011 391 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 SULT1C3Q6IMI6 304 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 CASP12Q6UXS9 341 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 ZNF527Q8NB42 609 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 CHP1Q99653 195 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 MRPL37Q9BZE1 423 aaKnown RBP10.71□□□□□ -0.69
UBR4-210ENST00000466969 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.69
UBR4-210ENST00000466969 PRDM13Q9H4Q3 707 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 MOV10Q9HCE1 1003 aaKnown RBP10.71□□□□□ -0.69
UBR4-210ENST00000466969 UBAP1Q9NZ09 502 aa10.71□□□□□ -0.69
UBR4-210ENST00000466969 SENP1Q9P0U3 644 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms