RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 IL11P20809 199 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 PRKAR1BP31321 381 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 SFTPDP35247 375 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 MNAT1P51948 309 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 SMSP52788 366 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 TPD52P55327 224 aaPredicted RBP12.53□□□□□ -0.4
UBA3-209ENST00000466763 CLDN18P56856 261 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 CLDN20P56880 219 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 NUP107P57740 925 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 EEFSECP57772 596 aaKnown RBP12.53□□□□□ -0.4
UBA3-209ENST00000466763 RPS3AP61247 264 aaKnown RBP12.53□□□□□ -0.4
UBA3-209ENST00000466763 COPZ1P61923 177 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 HOXC5Q00444 222 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 PLAURQ03405 335 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 EPS8Q12929 822 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 KRT72Q14CN4 511 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 BCL2A1Q16548 175 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 SGCBQ16585 318 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 TMEM44Q2T9K0 475 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 ACSF3Q4G176 576 aaPredicted RBP12.53□□□□□ -0.4
UBA3-209ENST00000466763 FAM91A1Q658Y4 838 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 MICU2Q8IYU8 434 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 LILRA2Q8N149 483 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 SSC4DQ8WTU2 575 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 ST8SIA1Q92185 356 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 MRGPRX4Q96LA9 322 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 TUBA1CQ9BQE3 449 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 SERINC1Q9NRX5 453 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 GMPR2Q9P2T1 348 aaKnown RBP12.53□□□□□ -0.4
UBA3-209ENST00000466763 PHF3Q92576 2039 aaKnown RBP12.52□□□□□ -0.4
UBA3-209ENST00000466763 C7orf72A4D263 438 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 CLCA1A8K7I4 914 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 B2RBV5 119 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 NME4O00746 187 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 ADAM11O75078 769 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 MFN2O95140 757 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 TFPIP10646 304 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 PRG2P13727 222 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 ADH6P28332 368 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 PTGER4P35408 488 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 EIF1AXP47813 144 aaKnown RBP12.52□□□□□ -0.41
UBA3-209ENST00000466763 SUCLG1P53597 346 aaKnown RBP12.52□□□□□ -0.41
UBA3-209ENST00000466763 PCBP3P57721 371 aaKnown RBP12.52□□□□□ -0.41
UBA3-209ENST00000466763 RAC1P63000 192 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 DMTNQ08495 405 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 TMEM176BQ3YBM2 270 aaPredicted RBP12.52□□□□□ -0.41
UBA3-209ENST00000466763 GLIPR1L2Q4G1C9 344 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 LRRC23Q53EV4 343 aaPredicted RBP12.52□□□□□ -0.41
UBA3-209ENST00000466763 RTL6Q6ICC9 239 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 DHRS4L2Q6PKH6 230 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 PLXDC2Q6UX71 529 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 PLEKHM3Q6ZWE6 761 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 P4HA3Q7Z4N8 544 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 GRAMD2AQ8IUY3 354 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 RNF217Q8TC41 542 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 RND1Q92730 232 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 DMRTA2Q96SC8 542 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 KCTD14Q9BQ13 255 aaPredicted RBP12.52□□□□□ -0.41
UBA3-209ENST00000466763 TTYH2Q9BSA4 534 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 PINK1Q9BXM7 581 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 SPAG4Q9NPE6 437 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 CTPS2Q9NRF8 586 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 RPS6KB2Q9UBS0 482 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 PACSIN3Q9UKS6 424 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 CHST2Q9Y4C5 530 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 FAM215AQ9Y5M1 114 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 ARHGAP21Q5T5U3 1957 aa12.52□□□□□ -0.41
UBA3-209ENST00000466763 GJE1A6NN92 205 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 KDM4EB2RXH2 506 aaPredicted RBP12.51□□□□□ -0.41
UBA3-209ENST00000466763 TNFSF11O14788 317 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 EFNA2O43921 213 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 DNAJA2O60884 412 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 GCM2O75603 506 aaPredicted RBP12.51□□□□□ -0.41
UBA3-209ENST00000466763 EPPINO95925 133 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 LDLRP01130 860 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 IFNA14P01570 189 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 GLI4P10075 376 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 PSMA4P25789 261 aaKnown RBP12.51□□□□□ -0.41
UBA3-209ENST00000466763 ELK4P28324 431 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 SLC7A1P30825 629 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 ACAA2P42765 397 aaKnown RBP12.51□□□□□ -0.41
UBA3-209ENST00000466763 GSK3BP49841 420 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 CLDN15P56746 228 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 RGS8P57771 180 aaPredicted RBP12.51□□□□□ -0.41
UBA3-209ENST00000466763 NCALDP61601 193 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 SELENBP1Q13228 472 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 VEZF1Q14119 521 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 SLC25A53Q5H9E4 307 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 PDSS1Q5T2R2 415 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 C8orf82Q6P1X6 216 aaPredicted RBP12.51□□□□□ -0.41
UBA3-209ENST00000466763 C16orf89Q6UX73 402 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 TRPM8Q7Z2W7 1104 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 GRINAQ7Z429 371 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 MRGPRGQ86SM5 289 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 MARVELD2Q8N4S9 558 aa12.51□□□□□ -0.41
UBA3-209ENST00000466763 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms