RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 UFSP2Q9NUQ7 469 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 SIGLEC8Q9NYZ4 499 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 WARS2Q9UGM6 360 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 XPO7Q9UIA9 1087 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF254O75437 659 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 LYPLA1O75608 230 aaPredicted RBP3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 IGHG4P01861 327 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 SEMG1P04279 462 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 GIG44P09565 113 aaPredicted RBP3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 P0C879 139 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 IGLL1P15814 213 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 MMP11P24347 488 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 EPHX2P34913 555 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 GCKP35557 465 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 RIPPLY3P57055 190 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 RIPK1Q13546 671 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF239Q16600 458 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC25A52Q3SY17 297 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 FRA10AC1Q70Z53 315 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 CCDC80Q76M96 950 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 PPP1R27Q86WC6 154 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 VSTM4Q8IW00 320 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 TMEM123Q8N131 208 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 EIF1ADQ8N9N8 165 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC25A38Q96DW6 304 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 FAM122AQ96E09 287 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 SERAC1Q96JX3 654 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 PSKH2Q96QS6 385 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 MCHR1Q99705 422 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF670Q9BS34 389 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 TMEM43Q9BTV4 400 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 Q9H3A6 140 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 FANCFQ9NPI8 374 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 SMOXQ9NWM0 555 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 IL36GQ9NZH8 169 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 DCDC2Q9UHG0 476 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 PHF11Q9UIL8 331 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 PTBP2Q9UKA9 531 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 PLLPQ9Y342 182 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 AK6Q9Y3D8 172 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 SMAD5-AS1Q9Y6J3 95 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 IKBKGQ9Y6K9 419 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 KANK1Q14678 1352 aa3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 CFAP65Q6ZU64 1925 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-211ENST00000466538 CLSPNQ9HAW4 1339 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 IGHV7-81A0A0B4J1V7 117 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 SMIM28A0A1B0GU29 152 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 LRP5LA4QPB2 252 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF705EA8MWA4 302 aaPredicted RBP3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 CXCL13O43927 109 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 PRKYO43930 277 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 TBL1XO60907 577 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 SURF6O75683 361 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 GNA14O95837 355 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 IGHDP01880 384 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 HOXD10P28358 340 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 NTSP30990 170 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 SSR1P43307 286 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC26A2P50443 739 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 PRKXP51817 358 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 UBE2HP62256 183 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 FGL1Q08830 312 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 C1orf61Q13536 156 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 AANATQ16613 207 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 TP53I3Q53FA7 332 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 SFT2D3Q587I9 215 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 ATL3Q6DD88 541 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 WDR74Q6RFH5 385 aaPredicted RBP3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 CXCL17Q6UXB2 119 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 GDPD3Q7L5L3 318 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 TRPM8Q7Z2W7 1104 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 CD177Q8N6Q3 437 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 OR51G2Q8NGK0 314 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZPLD1Q8TCW7 415 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 MS4A14Q96JA4 679 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 NAP1L5Q96NT1 182 aaPredicted RBP3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 RBM14Q96PK6 669 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZBTB18Q99592 522 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 SPATA16Q9BXB7 569 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 RAB34Q9BZG1 259 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 LRRN3Q9H3W5 708 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 EHD1Q9H4M9 534 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 ISG20L2Q9H9L3 353 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 TNFRSF19Q9NS68 423 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 ONECUT1Q9UBC0 465 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 PRPF19Q9UMS4 504 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 MOKQ9UQ07 419 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 VSIG4Q9Y279 399 aa3.22□□□□□ -1.89
CDC42BPA-211ENST00000466538 F5H6K3 240 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 CXCL11O14625 94 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 ZNF208O43345 1280 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 IGHV3-23P01764 117 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 CCDC130P13994 396 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 POLR2EP19388 210 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 VDAC1P21796 283 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 FGF9P31371 208 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 DAP3P51398 398 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 EFNB2P52799 333 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 AIF1P55008 147 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 IGLV3-21P80748 117 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms