RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CLDN20P56880 219 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 MGAT2Q10469 447 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 TMEM31Q5JXX7 168 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 FAM27D1Q5T7N8 215 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 RTL4Q6ZR62 310 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 RNF44Q7L0R7 432 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 CEACAM19Q7Z692 300 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 ZAR1Q86SH2 424 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 SAMD12Q8N8I0 201 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 SMPDL3BQ92485 455 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 UPRTQ96BW1 309 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 PTCHD1Q96NR3 888 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 UBL7Q96S82 380 aaPredicted RBP16.93■□□□□ 0.3
SYNE4-204ENST00000465425 ADGRL4Q9HBW9 690 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 STARD5Q9NSY2 213 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 POT1Q9NUX5 634 aa16.93■□□□□ 0.3
SYNE4-204ENST00000465425 A0A1B0GWA3 101 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 OR6C70A6NIJ9 312 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 IFNGP01579 166 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 RACK1P63244 317 aaKnown RBP16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ACTC1P68032 377 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ACTA1P68133 377 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ZNHIT3Q15649 155 aaPredicted RBP16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ALG10BQ5I7T1 473 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 SFXN4Q6P4A7 337 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ZC3H14Q6PJT7 736 aaKnown RBP16.92■□□□□ 0.3
SYNE4-204ENST00000465425 IL20RBQ6UXL0 311 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 TPRA1Q86W33 373 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 SLC44A3Q8N4M1 653 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 LILRB4Q8NHJ6 448 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 CTHRC1Q96CG8 243 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 PPIL3Q9H2H8 161 aaKnown RBP16.92■□□□□ 0.3
SYNE4-204ENST00000465425 EVA1AQ9H8M9 152 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ENAMQ9NRM1 1142 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 CYSLTR2Q9NS75 346 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 KLHL21Q9UJP4 597 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 RASD1Q9Y272 281 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 PTP4A3O75365 173 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 NKX2-2O95096 273 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 GYPBP06028 91 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 PEPDP12955 493 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 SLC6A6P31641 620 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ACVR1BP36896 505 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 YPEL5P62699 121 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 E2F1Q01094 437 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 PLAURQ03405 335 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 POU4F2Q12837 409 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ARHGAP11AQ6P4F7 1023 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 Q6ZSR6 202 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 VASH1Q7L8A9 365 aaPredicted RBP16.92■□□□□ 0.3
SYNE4-204ENST00000465425 OOSP2Q86WS3 158 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 ABHD4Q8TB40 342 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 RNF170Q96K19 258 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 TNFRSF13CQ96RJ3 184 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 MARVELD1Q9BSK0 173 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 PLSCR3Q9NRY6 295 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 FBXL4Q9UKA2 621 aa16.92■□□□□ 0.3
SYNE4-204ENST00000465425 CBX7O95931 251 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 FAM157BP0CG42 384 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 IL9P15248 144 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 RBMS1P29558 406 aaKnown RBP16.91■□□□□ 0.3
SYNE4-204ENST00000465425 CAPZA2P47755 286 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 OR12D2P58182 307 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 TRILQ7L0X0 811 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 TCTE3Q8IZS6 198 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 C17orf47Q8NEP4 570 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 SMAP2Q8WU79 429 aaPredicted RBP16.91■□□□□ 0.3
SYNE4-204ENST00000465425 ANKRD9Q96BM1 317 aaPredicted RBP16.91■□□□□ 0.3
SYNE4-204ENST00000465425 ERVMER34-1Q9H9K5 563 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 ING3Q9NXR8 418 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 FLRT3Q9NZU0 649 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 ZMIZ1Q9ULJ6 1067 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 SZT2Q5T011 3432 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 FAM221BA6H8Z2 402 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 SLC43A1O75387 559 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 RDH16O75452 317 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 SOX30O94993 753 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 IFI6P09912 130 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 SLC35E2P0CK97 266 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 SLC2A5P22732 501 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 PYCR1P32322 319 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 PITPNBP48739 271 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 TPMTP51580 245 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 ATP12AP54707 1039 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 RAB38P57729 211 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 OR10A3P58181 314 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 CRYZQ08257 329 aaKnown RBP16.91■□□□□ 0.3
SYNE4-204ENST00000465425 RPTNQ6XPR3 784 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 TMEM184AQ6ZMB5 413 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 YIPF7Q8N8F6 280 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 OR4M1Q8NGD0 313 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 SLC2A12Q8TD20 617 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 RFT1Q96AA3 541 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 GFM1Q96RP9 751 aaKnown RBP16.91■□□□□ 0.3
SYNE4-204ENST00000465425 TRIM2Q9C040 744 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 HAO2Q9NYQ3 351 aa16.91■□□□□ 0.3
SYNE4-204ENST00000465425 TNFP01375 233 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 EIF4EP06730 217 aaKnown RBP16.9■□□□□ 0.3
SYNE4-204ENST00000465425 RBM34P42696 430 aaKnown RBP16.9■□□□□ 0.3
SYNE4-204ENST00000465425 ZNF85Q03923 595 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms