RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 NUDT15Q9NV35 164 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PIPOXQ9P0Z9 390 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ISY1Q9ULR0 285 aaKnown RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF256Q9Y2P7 627 aaPredicted RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 MRPS7Q9Y2R9 242 aaKnown RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 COL16A1Q07092 1604 aaPredicted RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PTCH1Q13635 1447 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ATRXP46100 2492 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 A0A0G2JRQ6 117 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 TUBAL3A6NHL2 446 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 G3V4G9 280 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 KRTAP4-16G5E9R7 235 aaPredicted RBP1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 PANO1I0J062 215 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 FCN1O00602 326 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 PRRG1O14668 218 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 HDAC3O15379 428 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 PRKAB2O43741 272 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 PRKYO43930 277 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 KIAA0754O94854 1291 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 GNA14O95837 355 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 LALBAP00709 142 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 CCDC166P0CW27 439 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 RNH1P13489 461 aaKnown RBP1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ELK1P19419 428 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 VDAC1P21796 283 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ZBTB25P24278 435 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 PSMA5P28066 241 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 LAP3P28838 519 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 GCKP35557 465 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 PRKXP51817 358 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 HSPA2P54652 639 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 NUCB2P80303 420 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 SPIBQ01892 262 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF45Q02386 682 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 BCL2L1Q07817 233 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 MESDQ14696 234 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF79Q15937 498 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 SLC15A2Q16348 729 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 IL17AQ16552 155 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 SLC25A52Q3SY17 297 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 EOGTQ5NDL2 527 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 C1orf220Q5T0J3 134 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 CASC10Q5T4H9 136 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 LCE3EQ5T5B0 92 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 TTC23Q5W5X9 447 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 BLOC1S2Q6QNY1 142 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 UNQ9370/PRO34162Q6UXP9 181 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ACOT7LQ6ZUV0 252 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 KIAA1328Q86T90 577 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 MOB3BQ86TA1 216 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 LCA5Q86VQ0 697 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 TPRA1Q86W33 373 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 SLC38A6Q8IZM9 456 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 DHRSXQ8N5I4 330 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 BBS1Q8NFJ9 593 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 OR4D9Q8NGE8 314 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 OR52M1Q8NGK5 317 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 OR5L2Q8NGL0 311 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 MRPS31Q92665 395 aaKnown RBP1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 THRSPQ92748 146 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 TRIM44Q96DX7 344 aaPredicted RBP1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 SLC35E1Q96K37 410 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 B3GALT6Q96L58 329 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 RIT2Q99578 217 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 TXN2Q99757 166 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 SPATA16Q9BXB7 569 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 NMUR2Q9GZQ4 415 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ZDHHC11Q9H8X9 412 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 SMOXQ9NWM0 555 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 MARCH5Q9NX47 278 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ANAPC11Q9NYG5 84 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 IL36GQ9NZH8 169 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 EXTL2Q9UBQ6 330 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 WARS2Q9UGM6 360 aaKnown RBP1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 PCSK1NQ9UHG2 260 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ABCG2Q9UNQ0 655 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 MRPS33Q9Y291 106 aaKnown RBP1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 POLDIP2Q9Y2S7 368 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 AK6Q9Y3D8 172 aaKnown RBP1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 DDX49Q9Y6V7 483 aaKnown RBP1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 ATAD2BQ9ULI0 1458 aa1.31□□□□□ -2.2
NUCKS1-202ENST00000464938 THSD7BQ9C0I4 1608 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 IGKV1D-8A0A087WSZ0 117 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 LRP5LA4QPB2 252 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 PSMB11A5LHX3 300 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 FAM231BA6NCW3 169 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 E7ESA3 106 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 K7EQM0 130 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 HAT1O14929 419 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 ARPC3O15145 178 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 MAGEB3O15480 346 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 CXCL13O43927 109 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 HCN1O60741 890 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 TBL1XO60907 577 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 SNNO75324 88 aaPredicted RBP1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 SLITRK3O94933 977 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 LGI1O95970 557 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 KRT6AP02538 564 aa1.3□□□□□ -2.2
NUCKS1-202ENST00000464938 OR8U8P0C7N1 319 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms