RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ECT2Q9H8V3 914 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 CD274Q9NZQ7 290 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 RIMS3Q9UJD0 308 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 NCAPD2Q15021 1401 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 C15orf38-AP3S2A0A0A6YYH1 394 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 LOC100131303A0A0U1RQF7 123 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 H0Y8G0 127 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 L7N2F9 121 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 RTL8CO15255 209 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 CTAGE5O15320 804 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 DUX1O43812 170 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 MTX2O75431 263 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 SPAG6O75602 509 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 PTBP3O95758 552 aaKnown RBP3.91□□□□□ -1.78
PTCD3-205ENST00000464541 PCCBP05166 539 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 HPNP05981 417 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 CA3P07451 260 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 FUT1P19526 365 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 SERPINA2P20848 420 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 GBE1Q04446 702 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 IL24Q13007 206 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 DDX39BQ13838 428 aaKnown RBP3.91□□□□□ -1.78
PTCD3-205ENST00000464541 ZNF311Q5JNZ3 666 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 ZYG11AQ6WRX3 759 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 CENPUQ71F23 418 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 ALLCQ8N6M5 410 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 FAM133AQ8N9E0 248 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 BBOF1Q8ND07 529 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 OR13C2Q8NGS9 318 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 HPDLQ96IR7 371 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 VPS35Q96QK1 796 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 CITED1Q99966 193 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 OR51J1Q9H342 316 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 AGPAT5Q9NUQ2 364 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 DDX18Q9NVP1 670 aaKnown RBP3.91□□□□□ -1.78
PTCD3-205ENST00000464541 ASB3Q9Y575 518 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 SPACA6W5XKT8 324 aa3.91□□□□□ -1.78
PTCD3-205ENST00000464541 MEGF6O75095 1541 aa3.9□□□□□ -1.78
PTCD3-205ENST00000464541 KDRP35968 1356 aa3.9□□□□□ -1.78
PTCD3-205ENST00000464541 CARMIL1Q5VZK9 1371 aa3.9□□□□□ -1.78
PTCD3-205ENST00000464541 A0A087WZY1 265 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 OR6C65A6NJZ3 312 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 F8WDY8 70 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 H0YIV9 168 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 M0QX08 132 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 CXCL11O14625 94 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 VPS26AO75436 327 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 TIMP1P01033 207 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 IGHV3-48P01763 117 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 OR8U8P0C7N1 319 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 HNRNPA2B1P22626 353 aaKnown RBP3.9□□□□□ -1.79
PTCD3-205ENST00000464541 SPIBQ01892 262 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 RGS1Q08116 209 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 RIPPLY1Q0D2K3 151 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 PDZK1IP1Q13113 114 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 ATXN7L3Q14CW9 347 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-205ENST00000464541 HERPUD1Q15011 391 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 NDUFA9Q16795 377 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 TPGS2Q68CL5 300 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 NIPAL3Q6P499 406 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 IGFL2Q6UWQ7 119 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 LHFPL4Q7Z7J7 247 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 ZNF573Q86YE8 665 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 FAM184AQ8NB25 1140 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 OR2AP1Q8NGE2 309 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 TPD52L3Q96J77 140 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 ZBTB18Q99592 522 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 CCDC77Q9BR77 488 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 ZNF416Q9BWM5 594 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 STMN4Q9H169 189 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-205ENST00000464541 GLIPR2Q9H4G4 154 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 YY1AP1Q9H869 796 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 ZDHHC11Q9H8X9 412 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 NANOGQ9H9S0 305 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 APMAPQ9HDC9 416 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 SLCO1B1Q9Y6L6 691 aa3.9□□□□□ -1.79
PTCD3-205ENST00000464541 NSD2O96028 1365 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 XKRY2A2RUG3 117 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 TUBAL3A6NHL2 446 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 FAM47DPA6NHR8 397 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 FAM74A7A6NL05 159 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 E9PBE3 544 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 EFNA2O43921 213 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 CIB2O75838 187 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 OPN1LWP04000 364 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 HOXC4P09017 264 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-205ENST00000464541 CALCBP10092 127 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 PTGFRP43088 359 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 ATP5IP56385 69 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-205ENST00000464541 TIMM10P62072 90 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 WDR43Q15061 677 aaKnown RBP eCLIP3.89□□□□□ -1.79
PTCD3-205ENST00000464541 CEBPEQ15744 281 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 KCTD21Q4G0X4 260 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 ZNF658BQ4V348 819 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-205ENST00000464541 FAM74A3Q4VXF1 159 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 FAHD2BQ6P2I3 314 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-205ENST00000464541 WDR74Q6RFH5 385 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-205ENST00000464541 BBS5Q8N3I7 341 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 ZCCHC7Q8N3Z6 543 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms