RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	UQCRC1	P31930	480 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	SEC24C	P53992	1094 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	EEFSEC	P57772	596 aa	Known RBP	13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	RAC1	P63000	192 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	SELENBP1	Q13228	472 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	LIN52	Q52LA3	116 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	HBM	Q6B0K9	141 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	REP15	Q6BDI9	236 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	CNEP1R1	Q8N9A8	125 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	OIT3	Q8WWZ8	545 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	UCN2	Q96RP3	112 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	CGREF1	Q99674	301 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	SRXN1	Q9BYN0	137 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	COQ10B	Q9H8M1	238 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	CLEC4A	Q9UMR7	237 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	CAPN7	Q9Y6W3	813 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675		A0A1W2PNR3	127 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675		A0A1W2PNV4	684 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	FRS3	O43559	492 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	RCBTB2	O95199	551 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	CCNA2	P20248	432 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	PPIB	P23284	216 aa	Known RBP	13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	ASCL1	P50553	236 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	GNA13	Q14344	377 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	CYP51A1	Q16850	503 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	SLC25A53	Q5H9E4	307 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	C3orf33	Q6P1S2	294 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	VWA1	Q6PCB0	445 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	ESPNL	Q6ZVH7	1005 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	PLEKHM3	Q6ZWE6	761 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	LUZP2	Q86TE4	346 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	CMIP	Q8IY22	773 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	DPP10	Q8N608	796 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	BBS10	Q8TAM1	723 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	ST8SIA1	Q92185	356 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	SFXN3	Q9BWM7	321 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	PRRG4	Q9BZD6	226 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	CACYBP	Q9HB71	228 aa	Known RBP	13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	EXOSC3	Q9NQT5	275 aa	Known RBP	13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	THUMPD1	Q9NXG2	353 aa	Known RBP	13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	STOML1	Q9UBI4	398 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	ZNF175	Q9Y473	711 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	TEX15	Q9BXT5	2789 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	APC	P25054	2843 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	MPDZ	O75970	2070 aa		13.62	□□□□□ -0.23
SNU13-205	ENST00000463675	LRBA	P50851	2863 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	IGHV3-15	A0A0B4J1V0	119 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	CDHR4	A6H8M9	788 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	EVPLL	A8MZ36	301 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	MRAS	O14807	208 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	ADAMDEC1	O15204	470 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	DNAJA2	O60884	412 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	TNFSF13	O75888	250 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	SYNGR4	O95473	234 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	PRG2	P13727	222 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	KLK2	P20151	261 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	ADH6	P28332	368 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	SLC7A1	P30825	629 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	OPRM1	P35372	400 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	CPOX	P36551	454 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	CPA2	P48052	419 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	IDH2	P48735	452 aa	Known RBP	13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	DLX5	P56178	289 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	EEF1A1	P68104	462 aa	Known RBP	13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	CDK6	Q00534	326 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	SCARB2	Q14108	478 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	TRMT5	Q32P41	509 aa	Known RBP	13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	RUNDC3A	Q59EK9	446 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	SPATA21	Q7Z572	469 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	COMTD1	Q86VU5	262 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	MCEMP1	Q8IX19	187 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	CLIP4	Q8N3C7	705 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	POU5F2	Q8N7G0	328 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	TMEM234	Q8WY98	164 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	ROBO4	Q8WZ75	1007 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	ZFP3	Q96NJ6	502 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	ANKRD27	Q96NW4	1050 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	OR5B2	Q96R09	309 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	ELAC2	Q9BQ52	826 aa	Known RBP	13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	RNF122	Q9H9V4	155 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	CTPS2	Q9NRF8	586 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	ACER3	Q9NUN7	267 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	MCTS1	Q9ULC4	181 aa	Known RBP	13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	CORO2B	Q9UQ03	480 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	CHST2	Q9Y4C5	530 aa		13.61	□□□□□ -0.23
SNU13-205	ENST00000463675	TACC2	O95359	2948 aa		13.6	□□□□□ -0.23
SNU13-205	ENST00000463675		A0A0G2JPF8	293 aa		13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	LOC100653049	A0A140TA62	436 aa		13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	CFAP73	A6NFT4	308 aa		13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	HNRNPCL2	B2RXH8	293 aa		13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	HNRNPCL3	B7ZW38	293 aa		13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	FXYD1	O00168	92 aa		13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	ETV2	O00321	342 aa	Predicted RBP	13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	DYNC1I1	O14576	645 aa		13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	HNRNPCL1	O60812	293 aa	Known RBP	13.6	□□□□□ -0.23
SNU13-205	ENST00000463675	KRT34	O76011	436 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms