RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ABCG2Q9UNQ0 655 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 GAB2Q9UQC2 676 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 PRDM2Q13029 1718 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 RTEL1-TNFRSF6BF6WH68 1400 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 PHLPP2Q6ZVD8 1323 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 A0A1W2PPE3 182 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 FCN1O00602 326 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 DUS4LO95620 317 aaKnown RBP4.7□□□□□ -1.66
COPS3-205ENST00000463097 KRT6AP02538 564 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 AMBPP02760 352 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 TPM3P06753 285 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 HCKP08631 526 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 MCF2P10911 925 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 ATP1B2P14415 290 aaPredicted RBP4.7□□□□□ -1.66
COPS3-205ENST00000463097 PVRP15151 417 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 GNA11P29992 359 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 NMT1P30419 496 aaKnown RBP4.7□□□□□ -1.66
COPS3-205ENST00000463097 CRYBB2P43320 205 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 GYG1P46976 350 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 RND3P61587 244 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 ST3GAL3Q11203 375 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 IL18R1Q13478 541 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 PPP1R3AQ16821 1122 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 C14orf28Q4W4Y0 310 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 C1orf220Q5T0J3 134 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 LGSNQ5TDP6 509 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 UTS2BQ765I0 119 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 OTUD6AQ7L8S5 288 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 NOTCH2NLQ7Z3S9 236 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 TPRA1Q86W33 373 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 ERICH1Q86X53 443 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 OR2T33Q8NG76 320 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 OR4D9Q8NGE8 314 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 FAM81AQ8TBF8 368 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 MAGEE2Q8TD90 523 aaPredicted RBP4.7□□□□□ -1.66
COPS3-205ENST00000463097 UBE2E3Q969T4 207 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 C9orf85Q96MD7 179 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 PANX1Q96RD7 426 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 BCL7BQ9BQE9 202 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 BPIFA3Q9BQP9 254 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 RHBGQ9H310 441 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 NARFLQ9H6Q4 476 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 AZI2Q9H6S1 392 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 TMEM185BQ9H7F4 350 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 FAM120CQ9NX05 1096 aaKnown RBP4.7□□□□□ -1.66
COPS3-205ENST00000463097 WRAP73Q9P2S5 460 aaPredicted RBP4.7□□□□□ -1.66
COPS3-205ENST00000463097 CACNG5Q9UF02 275 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 NTNG1Q9Y2I2 539 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 CSDC2Q9Y534 153 aaKnown RBP4.7□□□□□ -1.66
COPS3-205ENST00000463097 USP6P35125 1406 aa4.7□□□□□ -1.66
COPS3-205ENST00000463097 PLEKHH1Q9ULM0 1364 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 ZNF840PA6NDX5 716 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 SAGE2PA6NJ88 616 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 ARHGEF9O43307 516 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 AP2A1O95782 977 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 IGHG4P01861 327 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 OR8G3PP0DMU2 310 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 RALBP11234 206 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 POLR2EP19388 210 aaKnown RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 IGFBP5P24593 272 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 FDFT1P37268 417 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 OR1G1P47890 313 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 CSRP3P50461 194 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 HLCSP50747 726 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 RPS15P62841 145 aaKnown RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 CALCOCO2Q13137 446 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 FASTKD3Q14CZ7 662 aaKnown RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 WDR43Q15061 677 aaKnown RBP eCLIP4.69□□□□□ -1.66
COPS3-205ENST00000463097 SIX1Q15475 284 aaPredicted RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 KLHL38Q2WGJ6 581 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 MEDAGQ5VYS4 303 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 LUZP2Q86TE4 346 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 OFCC1Q8IZS5 231 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 Q8N9P0 234 aaPredicted RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 SDR9C7Q8NEX9 313 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 BPIFCQ8NFQ6 507 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 OR9A4Q8NGU2 314 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 TSEN15Q8WW01 171 aaKnown RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 TRUB1Q8WWH5 349 aaKnown RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 VOPP1Q96AW1 172 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 TM4SF19Q96DZ7 209 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 TSNARE1Q96NA8 513 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 CCT8L2Q96SF2 557 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 CENPKQ9BS16 269 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 OCR1Q9BZK8 76 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 EXOSC3Q9NQT5 275 aaKnown RBP4.69□□□□□ -1.66
COPS3-205ENST00000463097 EHFQ9NZC4 300 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 NUDT4Q9NZJ9 180 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 ABCC10Q5T3U5 1492 aa4.69□□□□□ -1.66
COPS3-205ENST00000463097 IGLV4-3A0A075B6K6 122 aa4.68□□□□□ -1.66
COPS3-205ENST00000463097 IGHV3OR16-12A0A075B7B8 117 aa4.68□□□□□ -1.66
COPS3-205ENST00000463097 MEX3AA1L020 520 aaKnown RBP4.68□□□□□ -1.66
COPS3-205ENST00000463097 C9JVG2 144 aa4.68□□□□□ -1.66
COPS3-205ENST00000463097 NR5A2O00482 541 aa4.68□□□□□ -1.66
COPS3-205ENST00000463097 UGT2B17O75795 530 aa4.68□□□□□ -1.66
COPS3-205ENST00000463097 ATP5LO75964 103 aa4.68□□□□□ -1.66
COPS3-205ENST00000463097 IGLV1-44P01699 117 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms