RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TMBIM6P55061 237 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 DLX5P56178 289 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 ALDH6A1Q02252 535 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 CSTF3Q12996 717 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 ABRAXAS2Q15018 415 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 IMPG1Q17R60 797 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 SYT16Q17RD7 645 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 ADPRMQ3LIE5 342 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 FAM219BQ5XKK7 198 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 KANK2Q63ZY3 851 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 CLEC6AQ6EIG7 209 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 TMEM211Q6ICI0 200 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 OR4C11Q6IEV9 310 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 KRT80Q6KB66 452 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 CYP20A1Q6UW02 462 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 SCIMPQ6UWF3 145 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 C16orf89Q6UX73 402 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PAMR1Q6UXH9 720 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PLEKHG7Q6ZR37 379 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 COX15Q7KZN9 410 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PRSS41Q7RTY9 318 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 NUDT13Q86X67 352 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 DDIASQ8IXT1 998 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PRSS58Q8IYP2 241 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 ADGRG5Q8IZF4 528 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PRR18Q8N4B5 295 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 SIRT6Q8N6T7 355 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 AMER3Q8N944 861 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 ANKFN1Q8N957 763 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 OR11G2Q8NGC1 345 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 OR5T3Q8NGG3 340 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 OR51Q1Q8NH59 317 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 RP9Q8TA86 221 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PPP1R35Q8TAP8 253 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 STT3BQ8TCJ2 826 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 NCLNQ969V3 563 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 FKBP10Q96AY3 582 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 C1GALT1C1Q96EU7 318 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PEX11GQ96HA9 241 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 FAM46AQ96IP4 442 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PTCHD1Q96NR3 888 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 KCNJ15Q99712 375 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PKP2Q99959 881 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 BDH2Q9BUT1 245 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 SORBS1Q9BX66 1292 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 AICDAQ9GZX7 198 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 TRIM45Q9H8W5 580 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 WDR54Q9H977 334 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 BRF2Q9HAW0 419 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 NTN4Q9HB63 628 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 ZNF160Q9HCG1 818 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 TNFRSF12AQ9NP84 129 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PRDM7Q9NQW5 492 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 SLC22A11Q9NSA0 550 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 CTSFQ9UBX1 484 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 ZNF221Q9UK13 617 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 NXT1Q9UKK6 140 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 DIMT1Q9UNQ2 313 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PRELID3BQ9Y3B1 194 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 RAP2CQ9Y3L5 183 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 SPACA6W5XKT8 324 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 MEGF8Q7Z7M0 2845 aa5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 PHF3Q92576 2039 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-204ENST00000462198 CPAMD8Q8IZJ3 1885 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 A0A1W2PRG6 482 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 TCRBV3S1A0A5B6 114 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 ZNF98A6NK75 572 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 CENPXA8MT69 81 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 IDSB3KWA1 339 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 TMEM233B4DJY2 109 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 C4orf51C9J302 202 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 RTCAO00442 366 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 PLPP1O14494 284 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 CHST10O43529 356 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 RGS14O43566 566 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 B4GALT2O60909 372 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 DNAJB6O75190 326 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 PTP4A3O75365 173 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 CDC123O75794 336 aaPredicted RBP5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 SEMA3DO95025 777 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 ETHE1O95571 254 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 SNAP29O95721 258 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 PTTG1O95997 202 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 BCL10O95999 233 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 HPP00738 406 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 NPPAP01160 153 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 TFPTP0C1Z6 253 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 ZGLP1P0C6A0 271 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 LINC00032P0C843 101 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 SMIM10L1P0DMW3 83 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 RNH1P13489 461 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 HIST1H1TP22492 207 aaPredicted RBP5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 ATP5A1P25705 553 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 CD40P25942 277 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 SERPINB10P48595 397 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 HTR6P50406 440 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 RPL14P50914 215 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 BMXP51813 675 aa5.49□□□□□ -1.53
SMARCC1-204ENST00000462198 MAPK12P53778 367 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms