RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SRXN1Q9BYN0 137 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 NUF2Q9BZD4 464 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 OR51I1Q9H343 314 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 COQ10BQ9H8M1 238 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 BCO1Q9HAY6 547 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 KCNK9Q9NPC2 374 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 ACER3Q9NUN7 267 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 PNPOQ9NVS9 261 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 KLHL13Q9P2N7 655 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 BTNL2Q9UIR0 455 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 ING1Q9UK53 422 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-207ENST00000461798 CENPVL1A0A0U1RR11 272 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 SDHDO14521 159 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 ARHGEF9O43307 516 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 KIAA0513O60268 411 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 TMCC2O75069 709 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 SNNO75324 88 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 GCM2O75603 506 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 CPSF4O95639 269 aaKnown RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 CSTAP01040 98 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 OR12D1P0DN82 309 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 PAX1P15863 534 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 ENPP1P22413 925 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 FKBP2P26885 142 aaKnown RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 PGM1P36871 562 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 GSK3AP49840 483 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 RNF144AP50876 292 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 NR1H2P55055 460 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 WDR4P57081 412 aaKnown RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 SESN3P58005 492 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 NKX6-1P78426 367 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 LRRC74AQ0VAA2 488 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 P2RY6Q15077 328 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 GPR68Q15743 365 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 MAPK14Q16539 360 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 NDUFAF6Q330K2 333 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 TIGD2Q4W5G0 525 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 SPANXN4Q5MJ08 99 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 ATAD3BQ5T9A4 648 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 TYW3Q6IPR3 259 aaKnown RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 PPP4R4Q6NUP7 873 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 TFAP2EQ6VUC0 442 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 NUFIP2Q7Z417 695 aaKnown RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 SPATA19Q7Z5L4 167 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 ANKRD46Q86W74 232 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 TUSC5Q8IXB3 177 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 STEAP2Q8NFT2 490 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 OR4A15Q8NGL6 344 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 ABHD3Q8WU67 409 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 XAGE5Q8WWM1 108 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 TMEM234Q8WY98 164 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 PMM1Q92871 262 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 ROPN1LQ96C74 230 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 TMEM204Q9BSN7 226 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 THUMPD3Q9BV44 507 aaKnown RBP8.15□□□□□ -1.1
BRCA1-207ENST00000461798 AIG1Q9NVV5 245 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 THAP1Q9NVV9 213 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 PRDM4Q9UKN5 801 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 MKLN1Q9UL63 735 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 LIPT1Q9Y234 373 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 SLC35A3Q9Y2D2 325 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 GPR45Q9Y5Y3 372 aa8.15□□□□□ -1.1
BRCA1-207ENST00000461798 FLNAP21333 2647 aaKnown RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 UQCRHLA0A096LP55 91 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 PRAMEF27A3QJZ7 478 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF724A8MTY0 619 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 E9PBE3 544 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 SLCO1B7G3V0H7 640 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 HMGN4O00479 90 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 HDAC3O15379 428 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 CYTIPO60759 359 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 SMPD2O60906 423 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 H6PDO95479 791 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ALDOCP09972 364 aaKnown RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 PGCP20142 388 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 S100A3P33764 101 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 APOBEC1P41238 236 aaKnown RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 MAGEA8P43361 318 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 OR3A2P47893 321 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 CLK1P49759 484 aaKnown RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 UFM1P61960 85 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 FUT5Q11128 374 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 PDK3Q15120 406 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 FAM174BQ3ZCQ3 159 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 SFRP5Q5T4F7 317 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 HHATQ5VTY9 493 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ADAM5Q6NVV9 412 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 FRRS1Q6ZNA5 592 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 TMPPEQ6ZT21 453 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 PLEKHM3Q6ZWE6 761 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 OLIG3Q7RTU3 272 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 C16orf62Q7Z3J2 963 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 BIVMQ86UB2 503 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF619Q8N2I2 560 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF614Q8N883 585 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 GLB1L3Q8NCI6 653 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 RAB3IL1Q8TBN0 382 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 SLC25A43Q8WUT9 341 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 RAB8BQ92930 207 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms