RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 IGFBP1P08833 259 aaPredicted RBP22.3■■□□□ 1.16
U2AF1-204ENST00000459639 PTNP21246 168 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 SOX3P41225 446 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 CXCR4P61073 352 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 TEKQ02763 1124 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 CBFBQ13951 182 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 TMEM236Q5W0B7 351 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 C12orf73Q69YU5 71 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 TMPRSS7Q7RTY8 843 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 B4GALNT2Q8NHY0 566 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 TEX47Q8TBZ9 253 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 BPIFA2Q96DR5 249 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 ADNPQ9H2P0 1102 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 DSN1Q9H410 356 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 SLC25A19Q9HC21 320 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 MEPEQ9NQ76 525 aaPredicted RBP22.3■■□□□ 1.16
U2AF1-204ENST00000459639 C20orf141Q9NUB4 165 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 BLOC1S6Q9UL45 172 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 KPNA4O00629 521 aaPredicted RBP22.29■■□□□ 1.16
U2AF1-204ENST00000459639 CCDC159P0C7I6 412 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 CRHBPP24387 322 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 MST1P26927 711 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 SLC1A3P43003 542 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 GAS1P54826 345 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 MLF1P58340 268 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 C17orf67Q0P5P2 114 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 BROXQ5VW32 411 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 ATG4DQ86TL0 474 aaPredicted RBP22.29■■□□□ 1.16
U2AF1-204ENST00000459639 RPS19BP1Q86WX3 136 aaKnown RBP22.29■■□□□ 1.16
U2AF1-204ENST00000459639 DTX1Q86Y01 620 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 OR10G3Q8NGC4 313 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 SLC19A3Q9BZV2 496 aa22.29■■□□□ 1.16
U2AF1-204ENST00000459639 SLC1A7O00341 560 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 TP53I11O14683 189 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 MPZL2O60487 215 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 SERPINA7P05543 415 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 MAKP20794 623 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 ITPKBP27987 946 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 SSR4P51571 173 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 SUMO3P55854 103 aaPredicted RBP22.28■■□□□ 1.16
U2AF1-204ENST00000459639 ZNF620Q6ZNG0 422 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 IL22RA1Q8N6P7 574 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 RHOXF1Q8NHV9 184 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 ADAMTS17Q8TE56 1095 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 DUSP19Q8WTR2 217 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 IP6K3Q96PC2 410 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 DPH1Q9BZG8 443 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 CDCP1Q9H5V8 836 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 EGLN3Q9H6Z9 239 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 HHATLQ9HCP6 504 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 ASCL3Q9NQ33 180 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 RASSF1Q9NS23 344 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 TUBA8Q9NY65 449 aaPredicted RBP22.28■■□□□ 1.16
U2AF1-204ENST00000459639 KLRF1Q9NZS2 232 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 CDH10Q9Y6N8 788 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 AHCTF1Q8WYP5 2266 aa22.28■■□□□ 1.16
U2AF1-204ENST00000459639 RIF1Q5UIP0 2472 aaKnown RBP22.28■■□□□ 1.16
U2AF1-204ENST00000459639 UNC119BA6NIH7 251 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 ELOA3DA6NLF2 546 aaPredicted RBP22.27■■□□□ 1.16
U2AF1-204ENST00000459639 C17orf51A8MQB3 221 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 CDC42EP2O14613 210 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 SMNDC1O75940 238 aaKnown RBP eCLIP22.27■■□□□ 1.16
U2AF1-204ENST00000459639 HLCSP50747 726 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 GABARAPL2P60520 117 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 TUBA4AP68366 448 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 CDK5Q00535 292 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 Q0VFX4 171 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 ELOA3BQ3SY89 546 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 ELOA3Q8NG57 546 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 APH1BQ8WW43 257 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 ASB15Q8WXK1 588 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 OSTF1Q92882 214 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 UBE2FQ969M7 185 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 KLHDC3Q9BQ90 382 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 TMEM43Q9BTV4 400 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 PLA2G12AQ9BZM1 189 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 ADAM19Q9H013 955 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 ATP13A2Q9NQ11 1180 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 SDHAF3Q9NRP4 125 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 ZNF226Q9NYT6 803 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 IL20Q9NYY1 176 aa22.27■■□□□ 1.16
U2AF1-204ENST00000459639 MRPS18BQ9Y676 258 aaKnown RBP22.27■■□□□ 1.16
U2AF1-204ENST00000459639 ZFHX2Q9C0A1 2572 aaPredicted RBP22.27■■□□□ 1.16
U2AF1-204ENST00000459639 HTR3EA5X5Y0 456 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 CDC40O60508 579 aaKnown RBP eCLIP22.26■■□□□ 1.15
U2AF1-204ENST00000459639 WBP4O75554 376 aaKnown RBP22.26■■□□□ 1.15
U2AF1-204ENST00000459639 NUDT14O95848 222 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 CLPTM1O96005 669 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 GABRB1P18505 474 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 GIPRP48546 466 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 SMSP52788 366 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 COL28A1Q2UY09 1125 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 H3F3CQ6NXT2 135 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 TMEM81Q6P7N7 255 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 CASP12Q6UXS9 341 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 SECISBP2Q96T21 854 aaKnown RBP22.26■■□□□ 1.15
U2AF1-204ENST00000459639 METTL7AQ9H8H3 244 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 A0A087WXM4 84 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 TRIM64CA6NLI5 447 aa22.26■■□□□ 1.15
U2AF1-204ENST00000459639 IGF2P01344 180 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms