RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 TBC1D3DA0A087WVF3 549 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3IA0A087WXS9 549 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3EA0A087X179 549 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 DUXAA6NLW8 204 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3LB9A6J9 549 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 FGF17O60258 216 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 FZD7O75084 574 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 SOX30O94993 753 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 NGFRP08138 427 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3HP0C7X1 549 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 PEPDP12955 493 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 DUSP8Q13202 625 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 GXYLT1Q4G148 440 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 ACSM3Q53FZ2 586 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3CQ6IPX1 549 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TBC1D3Q8IZP1 549 aaPredicted RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 CNOT9Q92600 299 aaKnown RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 ZMYND19Q96E35 227 aaPredicted RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 PGLYRP3Q96LB9 341 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 KXD1Q9BQD3 176 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 SIGLEC7Q9Y286 467 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 CACNG2Q9Y698 323 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 CTSBP07858 339 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 ADRB1P08588 477 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 SBK2P0C263 348 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 CPMP14384 443 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 POLR2CP19387 275 aaPredicted RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 NT5EP21589 574 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 BTG1P62324 171 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 FAAH2Q6GMR7 532 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 ANKRD54Q6NXT1 300 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 LRRC28Q86X40 367 aaPredicted RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 GID4Q8IVV7 300 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 LNX2Q8N448 690 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 SRFBP1Q8NEF9 429 aaKnown RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 OR6C4Q8NGE1 309 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 PATE1Q8WXA2 126 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 NR4A3Q92570 626 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 GAL3ST3Q96A11 431 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 AHCYL2Q96HN2 611 aaKnown RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 ZNF559Q9BR84 538 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 KCNN2Q9H2S1 579 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 ERVMER34-1Q9H9K5 563 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 LYARQ9NX58 379 aaKnown RBP13.08□□□□□ -0.32
SCFD1-203ENST00000458591 FLRT3Q9NZU0 649 aa13.08□□□□□ -0.32
SCFD1-203ENST00000458591 PSMD9O00233 223 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 LAMP2P13473 410 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 ATF1P18846 271 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 GIFP27352 417 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 UQCRC1P31930 480 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 GABRA3P34903 492 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 TALDO1P37837 337 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 NAA10P41227 235 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-203ENST00000458591 SRP54P61011 504 aaKnown RBP13.07□□□□□ -0.32
SCFD1-203ENST00000458591 TFF2Q03403 129 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 ENPP7Q6UWV6 458 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 ZNF782Q6ZMW2 699 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-203ENST00000458591 RANBP3LQ86VV4 465 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-203ENST00000458591 SIAH3Q8IW03 269 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 ZNF619Q8N2I2 560 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 FRMD1Q8N878 549 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 COX18Q8N8Q8 333 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 OR4N2Q8NGD1 307 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-203ENST00000458591 OR1E3Q8WZA6 343 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 OR2A5Q96R48 311 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 UBL7Q96S82 380 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-203ENST00000458591 SARGQ9BW04 601 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 RAB11FIP5Q9BXF6 653 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 ZNF350Q9GZX5 532 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 CMC2Q9NRP2 79 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 B3GNT2Q9NY97 397 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 MRPL39Q9NYK5 338 aaKnown RBP13.07□□□□□ -0.32
SCFD1-203ENST00000458591 DAPP1Q9UN19 280 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 AK6Q9Y3D8 172 aaKnown RBP13.07□□□□□ -0.32
SCFD1-203ENST00000458591 C4orf47A7E2U8 309 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 IDSB3KWA1 339 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 TFP02787 698 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 MT-ND5P03915 603 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 NPR2P20594 1047 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 EMDP50402 254 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 ESCO2Q56NI9 601 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 PRRT3Q5FWE3 981 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 TMEM240Q5SV17 173 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 FHL5Q5TD97 284 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 FCRL6Q6DN72 434 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 SLC44A3Q8N4M1 653 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 LRRC17Q8N6Y2 441 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 SDR9C7Q8NEX9 313 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 OR8H1Q8NGG4 311 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 OR4K13Q8NH42 304 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 FLVCR1-AS1Q8TAF5 88 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 NDC1Q9BTX1 674 aa13.07□□□□□ -0.32
SCFD1-203ENST00000458591 JAM3Q9BX67 310 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms