RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 CDKN2DP55273 166 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ST8SIA6P61647 398 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 POLR2LP62875 67 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 IRF9Q00978 393 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 DEFA5Q01523 94 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PTSQ03393 145 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CACNG1Q06432 222 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CD47Q08722 323 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF234Q14588 700 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PCLAFQ15004 111 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 MLC1Q15049 377 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF79Q15937 498 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF674Q2M3X9 581 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 C2orf76Q3KRA6 126 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 HECTD2Q5U5R9 776 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZDHHC20Q5W0Z9 365 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PAMR1Q6UXH9 720 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PIWIL4Q7Z3Z4 852 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 FGD2Q7Z6J4 655 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TSPAN33Q86UF1 283 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 LDLRAD3Q86YD5 345 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SLITRK4Q8IW52 837 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SFTPA1Q8IWL2 248 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 YAF2Q8IY57 180 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 RYBPQ8N488 228 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF655Q8N720 491 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 AQP11Q8NBQ7 271 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 OR1S1Q8NH92 325 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 RXFP4Q8TDU9 374 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 RSC1A1Q92681 617 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 GCDHQ92947 438 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PHF21BQ96EK2 531 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TSPAN17Q96FV3 270 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 NPAS2Q99743 824 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CPPED1Q9BRF8 314 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 WRAP53Q9BUR4 548 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TRMT61BQ9BVS5 477 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TEX101Q9BY14 249 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PRRG3Q9BZD7 231 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CHST5Q9GZS9 411 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CSTL1Q9H114 145 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 MIR1-1HGQ9H1L0 117 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 P2RY12Q9H244 342 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SMURF1Q9HCE7 757 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SMCO4Q9NRQ5 59 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF358Q9NW07 568 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 FBXO34Q9NWN3 711 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 C14orf119Q9NWQ9 140 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ADA2Q9NZK5 511 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PDP1Q9P0J1 537 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 B4GALT6Q9UBX8 382 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 MUTYHQ9UIF7 546 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 C3orf18Q9UK00 162 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 GPR55Q9Y2T6 319 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 MRPS2Q9Y399 296 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CDH10Q9Y6N8 788 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 IGLV3-16A0A075B6K0 115 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 HMSDA8MTL9 139 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 DISC1C4P0D8 188 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 C5orf58C9J3I9 102 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 G3V2L1 256 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 M0R143 59 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 FOXE1O00358 373 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 KHDRBS3O75525 346 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 KAT7O95251 611 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PRNPP04156 253 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 EPHX1P07099 455 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CRYGCP07315 174 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 GAAP10253 952 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 KITP10721 976 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF44P15621 663 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ITGB7P26010 798 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 S100A2P29034 98 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SLC6A1P30531 599 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 VIPR1P32241 457 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 MAS1LP35410 378 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 AP3S2P59780 193 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 EMX2Q04743 252 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CDK5R2Q13319 367 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 NFATC2Q13469 925 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 KEAP1Q14145 624 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ELAVL3Q14576 367 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF460Q14592 562 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ODF1Q14990 250 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PEA15Q15121 130 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CNN3Q15417 329 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 USF2Q15853 346 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 NDUFAF6Q330K2 333 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 KLHL22Q53GT1 634 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PYY3Q5JQD4 70 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 FAM74A1Q5RGS3 127 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 LAIR2Q6ISS4 152 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TMEM71Q6P5X7 295 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 LRRN1Q6UXK5 716 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 DPPA4Q7L190 304 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PARS2Q7L3T8 475 aaKnown RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CHMP1BQ7LBR1 199 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 LRRC28Q86X40 367 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CFAP206Q8IYR0 622 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms