RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 C1orf61Q13536 156 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 PRTGQ2VWP7 1150 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 DEFB110Q30KQ9 67 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 SMRP1Q8NCR6 262 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 OR7G1Q8NGA0 311 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 NEIL3Q8TAT5 605 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 FYTTD1Q96QD9 318 aaKnown RBP16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 ZNF426Q9BUY5 554 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 ALG8Q9BVK2 526 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 RNF32Q9H0A6 362 aa16.97■□□□□ 0.31
SEMA3B-209ENST00000456560 CD8B2A6NJW9 211 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 TGFBR3LH3BV60 316 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 RNF13O43567 381 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 HCN1O60741 890 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 ADAM11O75078 769 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 ALX3O95076 343 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 CD8BP10966 210 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 PRKCAP17252 672 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 ARMC6Q6NXE6 501 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 MCATQ8IVS2 390 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 GRHL3Q8TE85 626 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 TOE1Q96GM8 510 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 TEAD3Q99594 435 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 BEX2Q9BXY8 128 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 C11orf54Q9H0W9 315 aaPredicted RBP16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 PPP1R3EQ9H7J1 279 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 DNAJB12Q9NXW2 375 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 COMMD3Q9UBI1 195 aa16.96■□□□□ 0.31
SEMA3B-209ENST00000456560 C2orf92A0A1B0GVN3 265 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 PRR23D1E9PI22 279 aaPredicted RBP16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 GTPBP1O00178 669 aaKnown RBP16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 PRR23D2P0DMB1 279 aaPredicted RBP16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 MYL9P24844 172 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 GALEQ14376 348 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 C19orf47Q8N9M1 422 aaKnown RBP16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 OR4N2Q8NGD1 307 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 UBASH3BQ8TF42 649 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 SENP5Q96HI0 755 aaPredicted RBP16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 CAPN10Q9HC96 672 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 INPP5EQ9NRR6 644 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 CYP8B1Q9UNU6 501 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC35A3Q9Y2D2 325 aa16.96■□□□□ 0.3
SEMA3B-209ENST00000456560 TRAV27A0A087WT01 109 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 FAM25AB3EWG3 89 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 FAM25CB3EWG5 89 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 FAM25GB3EWG6 89 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 NCR1O76036 304 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 SAGP10523 405 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 CTSEP14091 401 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 IL9P15248 144 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC2A5P22732 501 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 FHL1Q13642 323 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 PYDC2Q56P42 97 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 METAP1DQ6UB28 335 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 LINC00114Q6XXX2 140 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 RDH10Q8IZV5 341 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 ZDHHC1Q8WTX9 485 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 VSTM2LQ96N03 204 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 PTCHD1Q96NR3 888 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 TRIM2Q9C040 744 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 BAIAP2Q9UQB8 552 aa16.95■□□□□ 0.3
SEMA3B-209ENST00000456560 TMEM265A0A087WTH1 108 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 A0A0A6YYC8 382 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 DAPL1A0PJW8 107 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC22A31A6NKX4 558 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 B4DXG7 233 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 I3L1I5 382 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 TNFRSF10AO00220 468 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 DVL2O14641 736 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 HPGDSO60760 199 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 RGS9O75916 674 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 CSF2P04141 144 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 SSTR4P31391 388 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 RBM34P42696 430 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 RFX3P48380 749 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 IGLV3-21P80748 117 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 CD83Q01151 205 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 DBPQ10586 325 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 KLHL12Q53G59 568 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 CNIH2Q6PI25 160 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 OR51A7Q8NH64 312 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 FRMD6Q96NE9 622 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 TNFRSF13CQ96RJ3 184 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 TBX5Q99593 518 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 NPIPB9F8W1W9 429 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 HRKO00198 91 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 AGRPO00253 132 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 PLA2G10O15496 165 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 FOXS1O43638 330 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 REM1O75628 298 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 CHRNB1P11230 501 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 CFL1P23528 166 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 APEX1P27695 318 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 EVX1P49640 407 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 GALK2Q01415 458 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 SRSF5Q13243 272 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNHIT3Q15649 155 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 YIF1BQ5BJH7 314 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 UBE2J2Q8N2K1 259 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms