RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GRID1Q9ULK0 1009 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NFU1Q9UMS0 254 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CIB4A0PJX0 185 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LRP5LA4QPB2 252 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCDC151A5D8V7 595 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KLF11O14901 512 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PIP5K1BO14986 540 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LSM1O15116 133 aaKnown RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SCAMP2O15127 329 aaKnown RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RIPK2O43353 540 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 WIPF1O43516 503 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KIAA0513O60268 411 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CYTIPO60759 359 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TMCC2O75069 709 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 URI1O94763 535 aaPredicted RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SHBGP04278 402 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PABPC4LP0CB38 370 aaKnown RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 DHRS4L1P0CG22 281 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TFPIP10646 304 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 BCKDHAP12694 445 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CD40P25942 277 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IL2RGP31785 369 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TTKP33981 857 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RYKP34925 604 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 HPCAL1P37235 193 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 DIO1P49895 249 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FABP6P51161 128 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 P2RX1P51575 399 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ETF1P62495 437 aaKnown RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TUBA1BP68363 451 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TUBA4AP68366 448 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CKAP4Q07065 602 aaKnown RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MERTKQ12866 999 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCNIQ14094 377 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GPR68Q15743 365 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NRF1Q16656 503 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KLHL26Q53HC5 615 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 AGAP6Q5VW22 663 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KANK2Q63ZY3 851 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 C3orf33Q6P1S2 294 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 VHLLQ6RSH7 139 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TMEM108Q6UXF1 575 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RINLQ6ZS11 566 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 Q6ZSR9 355 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZCCHC23Q6ZST2 131 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TUBA1AQ71U36 451 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RELL1Q8IUW5 271 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCDC103Q8IW40 242 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CLECL1Q8IZS7 167 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 C4orf33Q8N1A6 199 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FBXL14Q8N1E6 418 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCDC63Q8NA47 563 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR6Y1Q8NGX8 325 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FAM110BQ8TC76 370 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GPR119Q8TDV5 335 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 APH1AQ96BI3 265 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MSI2Q96DH6 328 aaKnown RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MUCL1Q96DR8 90 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FBXO17Q96EF6 278 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RADILQ96JH8 1075 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ARL5BQ96KC2 179 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FCRL1Q96LA6 429 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ADAD1Q96M93 576 aaKnown RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MECRQ9BV79 373 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PRR14Q9BWN1 585 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 AMBRA1Q9C0C7 1298 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR10A4Q9H209 315 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 BCO1Q9HAY6 547 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FANCFQ9NPI8 374 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TIGARQ9NQ88 270 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CBLN4Q9NTU7 201 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GPATCH2Q9NW75 528 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SIRT5Q9NXA8 310 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PSMC3IPQ9P2W1 217 aaPredicted RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 STOML1Q9UBI4 398 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 STK38LQ9Y2H1 464 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLC25A15Q9Y619 301 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GPC6Q9Y625 555 aaPredicted RBP5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ATP23Q9Y6H3 246 aa5.26□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RNF103-CHMP3A0A140T963 221 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LOC100289279A0A1B0GTE1 492 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 A0A1W2PQD3 144 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GJE1A6NN92 205 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF716A6NP11 495 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NPIPB9F8W1W9 429 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KIF2AO00139 706 aaPredicted RBP5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GTPBP1O00178 669 aaKnown RBP5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SULT2B1O00204 365 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 AP3D1O14617 1153 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 AZIN1O14977 448 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RGS14O43566 566 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LMX1BO60663 402 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PLIN3O60664 434 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ABHD2P08910 425 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 UROSP10746 265 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ITGA2P17301 1181 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 USF1P22415 310 aaPredicted RBP5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ARRB2P32121 409 aa5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 EIF1P41567 113 aaKnown RBP5.25□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FRKP42685 505 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms