RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 UBTFL6P0CB48 400 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-208ENST00000452047 PPP3CBP16298 524 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 PSMB1P20618 241 aaKnown RBP11.11□□□□□ -0.63
CPSF4-208ENST00000452047 KHKP50053 298 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 NME5P56597 212 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 SESN3P58005 492 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 RAC3P60763 192 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 PPP2R2AP63151 447 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 TIGD2Q4W5G0 525 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 TFAP2EQ6VUC0 442 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 BEND4Q6ZU67 534 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 EIF3MQ7L2H7 374 aaKnown RBP11.11□□□□□ -0.63
CPSF4-208ENST00000452047 FCRLAQ7L513 359 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 NUFIP2Q7Z417 695 aaKnown RBP11.11□□□□□ -0.63
CPSF4-208ENST00000452047 SPATA19Q7Z5L4 167 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 TUSC5Q8IXB3 177 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 GABRG1Q8N1C3 465 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 ZNF619Q8N2I2 560 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 WFDC11Q8NEX6 87 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 RAB3IL1Q8TBN0 382 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 MGARPQ8TDB4 240 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 ROPN1LQ96C74 230 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 TLCD1Q96CP7 247 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 ZG16BQ96DA0 208 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 REXO5Q96IC2 774 aaKnown RBP11.11□□□□□ -0.63
CPSF4-208ENST00000452047 MAELQ96JY0 434 aaKnown RBP11.11□□□□□ -0.63
CPSF4-208ENST00000452047 QRSL1Q9H0R6 528 aaKnown RBP11.11□□□□□ -0.63
CPSF4-208ENST00000452047 OR10A4Q9H209 315 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 ING1Q9UK53 422 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-208ENST00000452047 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 DSCAMO60469 2012 aa11.11□□□□□ -0.63
CPSF4-208ENST00000452047 NSD1Q96L73 2696 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-208ENST00000452047 IGHV3-15A0A0B4J1V0 119 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 GOLGA8QA0A0J9YX86 632 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 A0A1W2PNR3 127 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 GOLGA8OA6NCC3 632 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 TRPC5OSA6NMA1 111 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 GOLGA8NF8WBI6 632 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 DYNC1I1O14576 645 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 GCM2O75603 506 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-208ENST00000452047 CYP7B1O75881 506 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 PGCP20142 388 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 ENPP1P22413 925 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 SLC7A1P30825 629 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 CHI3L1P36222 383 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-208ENST00000452047 CDKN2CP42773 168 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 MAGOHP61326 146 aaKnown RBP11.1□□□□□ -0.63
CPSF4-208ENST00000452047 TMEM201Q5SNT2 666 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 BEND6Q5SZJ8 279 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-208ENST00000452047 MAVSQ7Z434 540 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 STK32CQ86UX6 486 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 RNF130Q86XS8 419 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 ATP6V1C2Q8NEY4 427 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 PANX1Q96RD7 426 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 PIP5K1AQ99755 562 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 PSD2Q9BQI7 771 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 INPP5KQ9BT40 448 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 ACTR6Q9GZN1 396 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 SLC38A1Q9H2H9 487 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 BCO1Q9HAY6 547 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 ACER3Q9NUN7 267 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 SLC35A3Q9Y2D2 325 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 GPR52Q9Y2T5 361 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 ARID1AO14497 2285 aa11.1□□□□□ -0.63
CPSF4-208ENST00000452047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-208ENST00000452047 CCDC154A6NI56 674 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 CLDN24A6NM45 220 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 SLCO1B7G3V0H7 640 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 SMAD9O15198 467 aaKnown RBP11.09□□□□□ -0.63
CPSF4-208ENST00000452047 ADAM11O75078 769 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 PRKD3O94806 890 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 YES1P07947 543 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 CHRM4P08173 479 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 KITP10721 976 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 CHRNEQ04844 493 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 MERTKQ12866 999 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 ACKR1Q16570 336 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 GPAT3Q53EU6 434 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 SYT14P1Q58G82 188 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 BEX5Q5H9J7 111 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 PLEKHM3Q6ZWE6 761 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 HMGN2P46Q86SG4 172 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 TRIML2Q8N7C3 387 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 ANKFN1Q8N957 763 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 GLB1L3Q8NCI6 653 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-208ENST00000452047 TMEM234Q8WY98 164 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 TRNT1Q96Q11 434 aaKnown RBP11.09□□□□□ -0.63
CPSF4-208ENST00000452047 OR5B2Q96R09 309 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 OR52E6Q96RD3 313 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 CCDC106Q9BWC9 280 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 TMBIM4Q9HC24 238 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 FANCFQ9NPI8 374 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 EXOSC3Q9NQT5 275 aaKnown RBP11.09□□□□□ -0.63
CPSF4-208ENST00000452047 SLC6A13Q9NSD5 602 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 KLHL9Q9P2J3 617 aa11.09□□□□□ -0.63
CPSF4-208ENST00000452047 AGAP5A6NIR3 686 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 CYTIPO60759 359 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms