RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	ANXA8L1	Q5VT79	327 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	CAMKMT	Q7Z624	323 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	CROCCP2	Q86T23	111 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	CHDH	Q8NE62	594 aa	Predicted RBP	7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	VPS37A	Q8NEZ2	397 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	TOR1AIP2	Q8NFQ8	470 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	OR8J2	Q8NGG1	315 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	OR6K3	Q8NGY3	331 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	PNPT1	Q8TCS8	783 aa	Known RBP	7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	ZFP90	Q8TF47	636 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	ABHD3	Q8WU67	409 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	ZNF524	Q96C55	264 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	GMPPA	Q96IJ6	420 aa	Predicted RBP	7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	TEX37	Q96LM6	180 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	THUMPD3	Q9BV44	507 aa	Known RBP	7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	PLEKHF2	Q9H8W4	249 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	MEAF6	Q9HAF1	191 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	EXD2	Q9NVH0	621 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	PAQR5	Q9NXK6	330 aa	Predicted RBP	7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	KCNE5	Q9UJ90	142 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	GDF2	Q9UK05	429 aa	Predicted RBP	7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	ICAM5	Q9UMF0	924 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	WDR45	Q9Y484	360 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	ACTL7B	Q9Y614	415 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	USF3	Q68DE3	2245 aa		7.75	□□□□□ -1.17
RFX3-209	ENST00000451859	PRSS51	A0A1B0GVH4	220 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	DUXA	A6NLW8	204 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	DEFB108A	A8MXU0	73 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	SS18L1	O75177	396 aa	Predicted RBP	7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	SNUPN	O95149	360 aa	Known RBP	7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	AK1	P00568	194 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	KLK2	P20151	261 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	ELK4	P28324	431 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	EPHA3	P29320	983 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	RYK	P34925	604 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	CDKN2C	P42773	168 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	SUMO3	P55854	103 aa	Predicted RBP	7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	HPCA	P84074	193 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	FUT5	Q11128	374 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	SKP2	Q13309	424 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	CASP8	Q14790	479 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	TSC22D1	Q15714	1073 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	MAPK14	Q16539	360 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	DEFB113	Q30KQ7	82 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	ARHGAP11B	Q3KRB8	267 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	TIGD2	Q4W5G0	525 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	TMEM201	Q5SNT2	666 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	TYW3	Q6IPR3	259 aa	Known RBP	7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	C22orf34	Q6ZV56	151 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	FCRLA	Q7L513	359 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	STK32C	Q86UX6	486 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	RNF130	Q86XS8	419 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	WFDC8	Q8IUA0	241 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	TGIF2LY	Q8IUE0	185 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	KIRREL3	Q8IZU9	778 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	OR5W2	Q8NH69	310 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	GPR119	Q8TDV5	335 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	CPNE4	Q96A23	557 aa	Predicted RBP	7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	TESC	Q96BS2	214 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	ROPN1L	Q96C74	230 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	ALPK1	Q96QP1	1244 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	OR5B2	Q96R09	309 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	PANX1	Q96RD7	426 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	ZBTB18	Q99592	522 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	INPP5K	Q9BT40	448 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	ZNF350	Q9GZX5	532 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	CXXC4	Q9H2H0	198 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	COQ10B	Q9H8M1	238 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	TIGAR	Q9NQ88	270 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	AIG1	Q9NVV5	245 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	ELOVL5	Q9NYP7	299 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	NKIRAS1	Q9NYS0	192 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	HAO1	Q9UJM8	370 aa		7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	GPC6	Q9Y625	555 aa	Predicted RBP	7.74	□□□□□ -1.17
RFX3-209	ENST00000451859	CCDC154	A6NI56	674 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	CLDN24	A6NM45	220 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	TRPC5OS	A6NMA1	111 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	GJE1	A6NN92	205 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	HDAC3	O15379	428 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	KIAA0513	O60268	411 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	EIF4E2	O60573	245 aa	Known RBP	7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	SCN2B	O60939	215 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	BCAS1	O75363	584 aa	Predicted RBP	7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	ERLIN1	O75477	346 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	UGT2B17	O75795	530 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	SOX30	O94993	753 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	GOSR1	O95249	250 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	H6PD	O95479	791 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	TFPI	P10646	304 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	CCNA2	P20248	432 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	ENPP1	P22413	925 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	CRYGS	P22914	178 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	IL12A	P29459	219 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	RIPPLY3	P57055	190 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	SESN3	P58005	492 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	ADAM8	P78325	824 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	OCRL	Q01968	901 aa		7.73	□□□□□ -1.17
RFX3-209	ENST00000451859	CHRNE	Q04844	493 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms