RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DLX5P56178 289 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 CCNIQ14094 377 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 TRIM25Q14258 630 aaKnown RBP15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 HSPB2Q16082 182 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 CCNJQ5T5M9 372 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 GLYATQ6IB77 296 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 PLXDC2Q6UX71 529 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 PATL1Q86TB9 770 aaKnown RBP15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 ZNF619Q8N2I2 560 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 TRIM15Q9C019 465 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 OR2B2Q9GZK3 357 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 ZNF350Q9GZX5 532 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 MTHFD2LQ9H903 347 aaPredicted RBP15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 BATF3Q9NR55 127 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 TAS2R10Q9NYW0 307 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 ADGRG4Q8IZF6 3080 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 CXCR6O00574 342 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 SERPINB7O75635 380 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 ACTL6AO96019 429 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 RPSAP08865 295 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 ETS2P15036 469 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 HPGDP15428 266 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 GGT1P19440 569 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 BMP5P22003 454 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 CEACAM8P31997 349 aaPredicted RBP15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 CLK3P49761 638 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 GAS1P54826 345 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 FUT5Q11128 374 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 TRAP1Q12931 704 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 GPR68Q15743 365 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 SLC25A35Q3KQZ1 300 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 FLYWCH1Q4VC44 716 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 NSUN5P2Q63ZY6 315 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 LACC1Q8IV20 430 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 PEX5LQ8IYB4 626 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 ZNF527Q8NB42 609 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 RELL2Q8NC24 303 aaPredicted RBP15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 FAM156AQ8NDB6 213 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 OIT3Q8WWZ8 545 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 FIG4Q92562 907 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 FAM162AQ96A26 154 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 ASB9Q96DX5 294 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 LRGUKQ96M69 825 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 DOCK7Q96N67 2140 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 RTN4RQ9BZR6 473 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 SAP130Q9H0E3 1048 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 DSN1Q9H410 356 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 C6orf203Q9P0P8 240 aaPredicted RBP15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 EGFL7Q9UHF1 273 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 DKKL1Q9UK85 242 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 ITGB1BP2Q9UKP3 347 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 ZNF232Q9UNY5 417 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 USP22Q9UPT9 525 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 RPH3AQ9Y2J0 694 aaPredicted RBP15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 SNX13Q9Y5W8 968 aa15.42■□□□□ 0.06
PRPF40A-204ENST00000450303 CSMD1Q96PZ7 3565 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 PRAMEF27A3QJZ7 478 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 FADS1O60427 444 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 IL2RAP01589 272 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 CHRM4P08173 479 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 SRD5A2P31213 254 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 EVI2BP34910 448 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 ZNF136P52737 540 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 CHRNEQ04844 493 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 MYBPHQ13203 477 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 TYW3Q6IPR3 259 aaKnown RBP15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 CCDC80Q76M96 950 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 OR4K17Q8NGC6 315 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 RNF138Q8WVD3 245 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 RASSF5Q8WWW0 418 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 POP5Q969H6 163 aaKnown RBP15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 ZNF184Q99676 751 aaPredicted RBP15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 TUBA1CQ9BQE3 449 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 ZNF559Q9BR84 538 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 SLC38A1Q9H2H9 487 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 ARMC7Q9H6L4 198 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 MCCC2Q9HCC0 563 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 UBQLN4Q9NRR5 601 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 MED11Q9P086 117 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 PPP4R1LQ9P1A2 415 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 ACTR3BQ9P1U1 418 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 MKLN1Q9UL63 735 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 IFT52Q9Y366 437 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 POLQO75417 2590 aa15.41■□□□□ 0.06
PRPF40A-204ENST00000450303 TACC2O95359 2948 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 DVL2O14641 736 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 ZIC3O60481 467 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 FCMRO60667 390 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 IGKV1D-16P01601 117 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 DBIP07108 87 aaKnown RBP15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 DPP4P27487 766 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 UQCRC1P31930 480 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 KDELR2P33947 212 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 TIMP3P35625 211 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 ATP12AP54707 1039 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 GFRA1P56159 465 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 LARS2Q15031 903 aaKnown RBP15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 SF3B4Q15427 424 aaKnown RBP eCLIP15.4■□□□□ 0.061e-6■□□□□ 9.8
PRPF40A-204ENST00000450303 MAPK11Q15759 364 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 FXNQ16595 210 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms