RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 HEPACAM2A8MVW5 462 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF254O75437 659 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 RPS15P62841 145 aaKnown RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 TP53I3Q53FA7 332 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 AWAT2Q6E213 333 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 TMPRSS9Q7Z410 1059 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 OR52N1Q8NH53 320 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SLC35B4Q969S0 331 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 NAA11Q9BSU3 229 aaPredicted RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 BTBD2Q9BX70 525 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 QRSL1Q9H0R6 528 aaKnown RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 FAM212BQ9NTI7 297 aaPredicted RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 PGCP20142 388 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 ADRA1AP35348 466 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 LIPAP38571 399 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 GP2P55259 537 aaKnown RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 HTR4Q13639 388 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 RPS26P11Q5JNZ5 115 aaPredicted RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 NIPAL3Q6P499 406 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 PAPD4Q6PIY7 484 aaKnown RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 LAS2Q8IYD9 372 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 GPR26Q8NDV2 337 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SLC22A8Q8TCC7 542 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 ST8SIA4Q92187 359 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SCAMP4Q969E2 229 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 PKMYT1Q99640 499 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 KCNK12Q9HB15 430 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SLC22A23A1A5C7 686 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 GPR89AB7ZAQ6 455 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 HSBP1L1C9JCN9 74 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 MED6O75586 246 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 GPR89BP0CG08 455 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 CST5P28325 142 aaPredicted RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 PIN1Q13526 163 aaPredicted RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 CST9Q5W186 159 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF619Q8N2I2 560 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 LINC01465Q8N7H1 131 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 F2RL3Q96RI0 385 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 GALNT9Q9HCQ5 603 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 C1GALT1Q9NS00 363 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 UFSP2Q9NUQ7 469 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF16P17020 682 aaPredicted RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 CSNK2A1P68400 391 aaPredicted RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 PODNL1Q6PEZ8 512 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 KCNIP4Q6PIL6 250 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 ZC3H14Q6PJT7 736 aaKnown RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 PAQR9Q6ZVX9 377 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 GDPD3Q7L5L3 318 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 MAMDC2Q7Z304 686 aaPredicted RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 CSNK2A3Q8NEV1 391 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 TMEM239Q8WW34 195 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 C4orf36Q96KX1 117 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 CASD1Q96PB1 797 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 C20orf85Q9H1P6 137 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 SLCO5A1Q9H2Y9 848 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 APOBEC3BQ9UH17 382 aaKnown RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 C17orf113A0A1B0GUU1 675 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF860A6NHJ4 632 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 BPIP17213 487 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 TGM4P49221 684 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 STK19P49842 368 aaPredicted RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 GPR157Q5UAW9 335 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 LCTLQ6UWM7 567 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 HRH3Q9Y5N1 445 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 USP3Q9Y6I4 520 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 NUMBLQ9Y6R0 609 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 M0R3H8 397 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 PNMTP11086 282 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 SLC1A3P43003 542 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 RPS10P46783 165 aaKnown RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 HNRNPKP61978 463 aaKnown RBP eCLIP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 SFXN4Q6P4A7 337 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 DCLRE1CQ96SD1 692 aaKnown RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 LSM5Q9Y4Y9 91 aaKnown RBP13.05□□□□□ -0.32
ITGB4-202ENST00000449880 TMEM82A0PJX8 343 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 FADS1O60427 444 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 CR2P20023 1033 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 RAB33AQ14088 237 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 CATSPEREQ5SY80 951 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 KCTD11Q693B1 232 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF679Q8IYX0 411 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 IL17RDQ8NFM7 739 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 YIPF6Q96EC8 236 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
ITGB4-202ENST00000449880 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.04□□□□□ -0.32
ITGB4-202ENST00000449880 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.04□□□□□ -0.32
ITGB4-202ENST00000449880 A8MXE2 369 aa13.04□□□□□ -0.32
ITGB4-202ENST00000449880 E2F3O00716 465 aa13.04□□□□□ -0.32
ITGB4-202ENST00000449880 LTBQ06643 244 aa13.04□□□□□ -0.32
ITGB4-202ENST00000449880 RNF113BQ8IZP6 322 aaKnown RBP13.04□□□□□ -0.32
ITGB4-202ENST00000449880 METTL27Q8N6F8 245 aaPredicted RBP13.04□□□□□ -0.32
ITGB4-202ENST00000449880 NAXEQ8NCW5 288 aa13.04□□□□□ -0.32
ITGB4-202ENST00000449880 GAREM1Q9H706 876 aa13.04□□□□□ -0.32
ITGB4-202ENST00000449880 ERVMER34-1Q9H9K5 563 aa13.04□□□□□ -0.32
ITGB4-202ENST00000449880 SRA1Q9HD15 236 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms