RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 INTS12Q96CB8 462 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 SH3GL1Q99961 368 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 BTBD2Q9BX70 525 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 CADM1Q9BY67 442 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 C1orf21Q9H246 121 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 LRMDAQ9H2I8 198 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 GALNT9Q9HCQ5 603 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 Q9N2J8 555 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 DUSP22Q9NRW4 184 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 BEX4Q9NWD9 120 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 CORO2BQ9UQ03 480 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 CENPVL1A0A0U1RR11 272 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 SH3D21A4FU49 640 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 A8MXE2 369 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 FAM220BPB1ANY3 271 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 GSC2O15499 205 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 ATP5HO75947 161 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 CRHP06850 196 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 TFPTP0C1Z6 253 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 NR2F1P10589 423 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 NCK1P16333 377 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 AQP1P29972 269 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 KRT20P35900 424 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 PNLIPRP2P54317 469 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 GPAT3Q53EU6 434 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 SHEQ5VZ18 495 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 ASRGL1Q7L266 308 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 CHMP1BQ7LBR1 199 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 LUZP2Q86TE4 346 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 MICU2Q8IYU8 434 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 TMEM19Q96HH6 336 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 SDF2Q99470 211 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 KCTD14Q9BQ13 255 aaPredicted RBP12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 QRSL1Q9H0R6 528 aaKnown RBP12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 GSX1Q9H4S2 264 aaPredicted RBP12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 ALG2Q9H553 416 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 A4GALTQ9NPC4 353 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 NDE1Q9NXR1 346 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 GALNT8Q9NY28 637 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 CD300AQ9UGN4 299 aa12.4□□□□□ -0.42
PDLIM2-213ENST00000448520 HRNRQ86YZ3 2850 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 ANKRD65E5RJM6 399 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 MSTNO14793 375 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 TSPAN2O60636 221 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 FCMRO60667 390 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 HNRNPCL1O60812 293 aaKnown RBP12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 DNAJA2O60884 412 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 DNAJC8O75937 253 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 H6PDO95479 791 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 CD53P19397 219 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 LHX2P50458 406 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 ANXA11P50995 505 aaKnown RBP12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 CDK6Q00534 326 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 CHRNEQ04844 493 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 SCARB2Q14108 478 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 VMACQ2NL98 169 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 ARHGAP11BQ3KRB8 267 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 CYP27C1Q4G0S4 372 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 DNAL1Q4LDG9 190 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 ATAD3BQ5T9A4 648 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 OR2A2Q6IF42 318 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 FRRS1Q6ZNA5 592 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 GRAMD2AQ8IUY3 354 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 OR2T12Q8NG77 320 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 FAM110BQ8TC76 370 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 REXO5Q96IC2 774 aaKnown RBP12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 SFXN2Q96NB2 322 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 ADOQ96SZ5 270 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 SLC38A1Q9H2H9 487 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 EXD2Q9NVH0 621 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 CLCF1Q9UBD9 225 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 P2RX2Q9UBL9 471 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 EGFL7Q9UHF1 273 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 MKLN1Q9UL63 735 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 PRPF19Q9UMS4 504 aaKnown RBP12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 WIF1Q9Y5W5 379 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 VPS13CQ709C8 3753 aa12.39□□□□□ -0.43
PDLIM2-213ENST00000448520 TTC36A6NLP5 189 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 DUXAA6NLW8 204 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 C17orf51A8MQB3 221 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 ZIC3O60481 467 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 GCM2O75603 506 aaPredicted RBP12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 IL33O95760 270 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 PEPDP12955 493 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 ZNF708P17019 499 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 IL12BP29460 328 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 PCGF2P35227 344 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 PGM1P36871 562 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 STARP49675 285 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 CLDN18P56856 261 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 GPR68Q15743 365 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 DECR1Q16698 335 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 GRAMD1BQ3KR37 738 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 SAMD4BQ5PRF9 694 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 TYW3Q6IPR3 259 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 C11orf65Q8NCR3 313 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 WFDC11Q8NEX6 87 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 UTP4Q969X6 686 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms