RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ZNF628Q5EBL2 1059 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 FAM69AQ5T7M9 428 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 C1orf53Q5VUE5 145 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PAPD4Q6PIY7 484 aaKnown RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SYT13Q7L8C5 426 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 CLMPQ9H6B4 373 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SOX17Q9H6I2 414 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 DCAF13Q9NV06 445 aaKnown RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PRAF2O60831 178 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 TEAD1P28347 426 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PRKAR1BP31321 381 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 GGT5P36269 586 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PLCXD3Q63HM9 321 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 OR2A2Q6IF42 318 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PLBD1Q6P4A8 553 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PGAP1Q75T13 922 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 RNF175Q8N4F7 328 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 MORN4Q8NDC4 146 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 FKRPQ9H9S5 495 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 APMAPQ9HDC9 416 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 NUP50Q9UKX7 468 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 FBXO7Q9Y3I1 522 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PCDHGA8Q9Y5G5 932 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 TIMM8AO60220 97 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 HTR3BO95264 441 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SERPINE2P07093 398 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 BMP2P12643 396 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SDC1P18827 310 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PRKXP51817 358 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SRPXP78539 464 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 CCNJQ5T5M9 372 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 KLBQ86Z14 1044 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 GDPD1Q8N9F7 314 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 OR4K15Q8NH41 348 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 ASB12Q8WXK4 309 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PSMF1Q92530 271 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SLAMF9Q96A28 289 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SGCZQ96LD1 299 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 INSM2Q96T92 566 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 FEVQ99581 238 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 B3GNT2Q9NY97 397 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 CCDC187A0A096LP49 1063 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF814B7Z6K7 855 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 F5H5K5 113 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 GM2AP17900 193 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 IST1P53990 364 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 GRB2P62993 217 aaKnown RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 KCNJ10P78508 379 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 HTRA3P83110 453 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 MOCOSQ96EN8 888 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 NDRG4Q9ULP0 352 aaKnown RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 MAB21L2Q9Y586 359 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PRAMEF25A6NGN4 478 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 TMEM212A6NML5 194 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 FABP1P07148 127 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 RAB40ALP0C0E4 278 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 NKAIN1Q4KMZ8 207 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 LIPKQ5VXJ0 399 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF695Q8IW36 515 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SLC35F3Q8IY50 421 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ABHD11Q8NFV4 315 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 WDR20Q8TBZ3 569 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ADAMTS19Q8TE59 1207 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 RAB40AQ8WXH6 277 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 GIMAP5Q96F15 307 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 UBXN10Q96LJ8 280 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SAMD8Q96LT4 415 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 LYSMD1Q96S90 227 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 WACQ9BTA9 647 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF224Q9NZL3 707 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ABCA3Q99758 1704 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SUSD5O60279 629 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SEC14L2O76054 403 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SFTPBP07988 381 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 PAX7P23759 505 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 F2RL1P55085 397 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 RLN3Q8WXF3 142 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 TREX2Q9BQ50 279 aaPredicted RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 MAN2C1Q9NTJ4 1040 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 KIF25Q9UIL4 384 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 FXYD6-FXYD2A0A087WZ82 144 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 DSCR3O14972 297 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 H2AFB2P0C5Z0 115 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CAPN3P20807 821 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 DPP4P27487 766 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 THBS3P49746 956 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SNTB2Q13425 540 aaKnown RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 MOGSQ13724 837 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SBSNQ6UWP8 590 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SLC46A3Q7Z3Q1 461 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 LRFN5Q96NI6 719 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 FXYD6Q9H0Q3 95 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 NFS1Q9Y697 457 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 TK1P04183 234 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 HLCSP50747 726 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 BMXP51813 675 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 RPL23AP62750 156 aaKnown RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 DPY19L2P1Q6NXN4 242 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CD300LGQ6UXG3 332 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 TMEM150AQ86TG1 271 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms