RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PAQR6Q6TCH4 344 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 APOOLQ6UXV4 268 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 KIF6Q6ZMV9 814 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 STOX1Q6ZVD7 989 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 KCNMB4Q86W47 210 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 SERPINA9Q86WD7 417 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 TRIM69Q86WT6 500 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 SLC35F2Q8IXU6 374 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 MAPK1IP1LQ8NDC0 245 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 SDR9C7Q8NEX9 313 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR1B1Q8NGR6 318 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 TBCKQ8TEA7 893 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 AENQ8WTP8 325 aaKnown RBP3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 SLC38A4Q969I6 547 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 TIMD4Q96H15 378 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 IFT74Q96LB3 600 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 C12orf42Q96LP6 360 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 RCHY1Q96PM5 261 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 TGS1Q96RS0 853 aaKnown RBP3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 SYT11Q9BT88 431 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 DPH7Q9BTV6 452 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 AZI2Q9H6S1 392 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 SUDS3Q9H7L9 328 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 VCPKMTQ9H867 229 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 WDR41Q9HAD4 459 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 ADGRL4Q9HBW9 690 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 FAM120CQ9NX05 1096 aaKnown RBP3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 PEF1Q9UBV8 284 aaKnown RBP3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 IKZF2Q9UKS7 526 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 AK6Q9Y3D8 172 aaKnown RBP3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 OARD1Q9Y530 152 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 ERICH3Q5RHP9 1530 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 UHRF1BP1Q6BDS2 1440 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 TRBV7-9A0A0J9YWB2 115 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 SMCO3A2RU48 225 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 IGLON5A6NGN9 336 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 FRG2CA6NGY1 282 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 C11orf98E9PRG8 122 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 G3V2L1 256 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 RAMP1O60894 148 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 TRIM3O75382 744 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 NXPH4O95158 308 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 DUS4LO95620 317 aaKnown RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 LGI1O95970 557 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 GAPDHP04406 335 aaKnown RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 HMGB2P26583 209 aaKnown RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 BMI1P35226 326 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 NUP62P37198 522 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 RPS5P46782 204 aaKnown RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 GNPDA1P46926 289 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 CD151P48509 253 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 CSNK1EP49674 416 aaKnown RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 RAB9AP51151 201 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 NDST2P52849 883 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 ERVK-16P61578 105 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 CYCSP99999 105 aaKnown RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 ACY1Q03154 408 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 RIPPLY1Q0D2K3 151 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 RAB40BQ12829 278 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 KLRB1Q12918 225 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 KIAA0141Q14154 515 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 CRMP1Q14194 572 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 SLC15A2Q16348 729 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 KLHL38Q2WGJ6 581 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 SBK1Q52WX2 424 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 HIKESHIQ53FT3 197 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 FBXO48Q5FWF7 155 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 AGBL2Q5U5Z8 902 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 WSCD1Q658N2 575 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 FAHD2BQ6P2I3 314 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 STAC2Q6ZMT1 411 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 UTS2BQ765I0 119 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 CEACAM19Q7Z692 300 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF781Q8N8C0 355 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 C15orf54Q8N8G6 183 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 PRSS33Q8NF86 280 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR10G7Q8NGN6 311 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR1L6Q8NGR2 347 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF519Q8TB69 540 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 C11orf52Q96A22 123 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 CNRIP1Q96F85 164 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 FAHD2AQ96GK7 314 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 IL4I1Q96RQ9 567 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 SIKE1Q9BRV8 207 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 NIPSNAP3BQ9BS92 247 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 CABLES2Q9BTV7 478 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 MCRIP2Q9BUT9 160 aaKnown RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 SPATA16Q9BXB7 569 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 LIME1Q9H400 295 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 HAUS4Q9H6D7 363 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 CYP3A43Q9HB55 503 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 NT5MQ9NPB1 228 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 MRPL22Q9NWU5 206 aaKnown RBP3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 VANGL2Q9ULK5 521 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 TBC1D24Q9ULP9 559 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 COMMD3-BMI1R4GMX3 469 aa3.64□□□□□ -1.83
HMGB1P48-201ENST00000446155 METP08581 1390 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 NCOA1Q15788 1441 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 RIMS1Q86UR5 1692 aaKnown RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 IGLV7-46A0A075B6I9 117 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms