RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 RAB3BP20337 219 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 F8A1P23610 371 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 OR1Q1Q15612 314 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 GSG1Q2KHT4 349 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 MRM1Q6IN84 353 aaKnown RBP13.17□□□□□ -0.3
ERCC3-203ENST00000445889 SLC44A3Q8N4M1 653 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 OR2L3Q8NG85 312 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF671Q8TAW3 534 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 TMEM239Q8WW34 195 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 HS6ST2Q96MM7 605 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 SORCS2Q96PQ0 1159 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 OR14A2Q96R54 314 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 TNFRSF13CQ96RJ3 184 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 C1QTNF2Q9BXJ5 285 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 PCBD2Q9H0N5 130 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 SLC25A18Q9H1K4 315 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 CACNA1IQ9P0X4 2223 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 KIAA0100Q14667 2235 aaKnown RBP13.17□□□□□ -0.3
ERCC3-203ENST00000445889 SYT5O00445 386 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 CDK2AP1O14519 115 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 TSPAN4O14817 238 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 M6PRP20645 277 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 HES5Q5TA89 166 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 MFSD12Q6NUT3 480 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 TMEM64Q6YI46 380 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 Q6ZTK2 550 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 MTSS1LQ765P7 747 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 ZAR1Q86SH2 424 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF433Q8N7K0 673 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-203ENST00000445889 OR4K13Q8NH42 304 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 OR51Q1Q8NH59 317 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 SUSD6Q92537 303 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 HHIPL1Q96JK4 782 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF346Q9UL40 294 aaKnown RBP13.17□□□□□ -0.3
ERCC3-203ENST00000445889 SPATA2Q9UM82 520 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 NUBP2Q9Y5Y2 271 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 KIAA1549LQ6ZVL6 1849 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 EDDM13A0A1B0GTR0 161 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 RGS11O94810 467 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 CLTBP09497 229 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 PPM1AP35813 382 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ERVK-21P61565 698 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 FGL2Q14314 439 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 EXOSC7Q15024 291 aaKnown RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ZIC1Q15915 447 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 CD276Q5ZPR3 534 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 FTMTQ8N4E7 242 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 PGLYRP3Q96LB9 341 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 RBP7Q96R05 134 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 IL21RQ9HBE5 538 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 DLL4Q9NR61 685 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 MDC1Q14676 2089 aaKnown RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 TP53BP1Q12888 1972 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 A0A1W2PP55 124 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 TRABD2BA6NFA1 517 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 LRRC72A6NJI9 287 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 POM121CA8CG34 1229 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 SLC9A3R1O14745 358 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 OR5F1O95221 314 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 EML2O95834 649 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 SBK2P0C263 348 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 PRKAR1BP31321 381 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ZP1P60852 638 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ARHGEF6Q15052 776 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 FAAH2Q6GMR7 532 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 TMEM65Q6PI78 240 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 GALNT11Q8NCW6 608 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 TMIEQ8NEW7 156 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 BPIFA2Q96DR5 249 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 SDF2Q99470 211 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 SLC6A17Q9H1V8 727 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 WDR26Q9H7D7 661 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ERVMER34-1Q9H9K5 563 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 MEPEQ9NQ76 525 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 KLK11Q9UBX7 282 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 LAMA1P25391 3075 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 OC90Q02509 493 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 HSF2Q03933 536 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 GRK1Q15835 563 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 AANATQ16613 207 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 HYAL4Q2M3T9 481 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF765Q7L2R6 523 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 LINGO2Q7L985 606 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 PRSS41Q7RTY9 318 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 MRPL43Q8N983 215 aaKnown RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 SLAIN1Q8ND83 568 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 RPLP0P6Q8NHW5 317 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ZNRF4Q8WWF5 429 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 NXPE2Q96DL1 559 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 AHCYL2Q96HN2 611 aaKnown RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 OR2M2Q96R28 347 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 SEC22CQ9BRL7 303 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 MTHFD2LQ9H903 347 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-203ENST00000445889 ADGRL4Q9HBW9 690 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 PRSS16Q9NQE7 514 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms