RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 ANKDD1AQ495B1 522 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 ZNF324BQ6AW86 544 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 IL20RBQ6UXL0 311 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 C16orf47Q6ZP98 133 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 PRR22Q8IZ63 422 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 RNF113BQ8IZP6 322 aaKnown RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 CLIP4Q8N3C7 705 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 OR4C15Q8NGM1 316 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 STK35Q8TDR2 534 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 CNOT9Q92600 299 aaKnown RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 OTUB1Q96FW1 271 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 HS6ST2Q96MM7 605 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 PIP5K1AQ99755 562 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 PTGES2Q9H7Z7 377 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 ZBTB20Q9HC78 741 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 S100A14Q9HCY8 104 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 AGPAT4Q9NRZ5 378 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 C6orf203Q9P0P8 240 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 DNAJB9Q9UBS3 223 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 SLC13A4Q9UKG4 626 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 A4GNTQ9UNA3 340 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 PTPRQQ9UMZ3 2332 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 BOLA2-SMG1P6H3BVE0 249 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 CASQ2O14958 399 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 MAGEB3O15480 346 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 PEX1O43933 1283 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 NME6O75414 186 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 ZNF682O95780 498 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 CASP9P55211 416 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 CXADRP78310 365 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 COL9A2Q14055 689 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 KPNB1Q14974 876 aaKnown RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 ENPP6Q6UWR7 440 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 SIAH3Q8IW03 269 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 FAM109AQ8N4B1 249 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 PIP4P2Q8N4L2 257 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 RNF148Q8N7C7 305 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 ADPRHL1Q8NDY3 354 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 SLC38A4Q969I6 547 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 DCBLD2Q96PD2 775 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 RTN4RQ9BZR6 473 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 AMBRA1Q9C0C7 1298 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 DEPPQ9NTK1 212 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 KLRF1Q9NZS2 232 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 RABL2AQ9UBK7 228 aaPredicted RBP7.97□□□□□ -1.13
FXR1-203ENST00000445140 AP4B1Q9Y6B7 739 aa7.97□□□□□ -1.13
FXR1-203ENST00000445140 HEATR5AQ86XA9 2040 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 NPIPB7O75200 414 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 PRKCAP17252 672 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 IFNA8P32881 189 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 CTBP2P56545 445 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 RGS8P57771 180 aaPredicted RBP7.96□□□□□ -1.13
FXR1-203ENST00000445140 COL28A1Q2UY09 1125 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 FCRLBQ6BAA4 426 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 ULK3Q6PHR2 472 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 MDGA2Q7Z553 956 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 ATG4DQ86TL0 474 aaPredicted RBP7.96□□□□□ -1.13
FXR1-203ENST00000445140 MARCH3Q86UD3 253 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 SLC22A16Q86VW1 577 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 SVOPLQ8N434 492 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 OR4D11Q8NGI4 311 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 OR1J4Q8NGS1 313 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 THAP3Q8WTV1 239 aaPredicted RBP7.96□□□□□ -1.13
FXR1-203ENST00000445140 CCDC124Q96CT7 223 aaKnown RBP7.96□□□□□ -1.13
FXR1-203ENST00000445140 NR1H4Q96RI1 486 aaPredicted RBP7.96□□□□□ -1.13
FXR1-203ENST00000445140 UBL7Q96S82 380 aaPredicted RBP7.96□□□□□ -1.13
FXR1-203ENST00000445140 POTEKPQ9BYX7 375 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 FANCFQ9NPI8 374 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 B3GNT3Q9Y2A9 372 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 SPIN1Q9Y657 262 aaPredicted RBP7.96□□□□□ -1.13
FXR1-203ENST00000445140 DCHS1Q96JQ0 3298 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 NCKAP5O14513 1909 aa7.96□□□□□ -1.13
FXR1-203ENST00000445140 B4DXG7 233 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 FAM47E-STBD1D6RA91 191 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 ACOT7O00154 380 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 MASP2O00187 686 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 AP3D1O14617 1153 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 DEAF1O75398 565 aaPredicted RBP7.96□□□□□ -1.14
FXR1-203ENST00000445140 CRYABP02511 175 aaKnown RBP7.96□□□□□ -1.14
FXR1-203ENST00000445140 TSPAN19P0C672 248 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 TCN1P20061 433 aaPredicted RBP7.96□□□□□ -1.14
FXR1-203ENST00000445140 HTR2AP28223 471 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 POLR2HP52434 150 aaKnown RBP7.96□□□□□ -1.14
FXR1-203ENST00000445140 B3GALT5-AS1P59052 145 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 VLDLRP98155 873 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 ST3GAL3Q11203 375 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 CNPY1Q3B7I2 92 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 CD300LDQ6UXZ3 194 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 SPATC1Q76KD6 591 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 ZDHHC21Q8IVQ6 265 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 SULF2Q8IWU5 870 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 FAM86B1Q8N7N1 296 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 OR6T1Q8NGN1 323 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 PHOSPHO1Q8TCT1 267 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 CANT1Q8WVQ1 401 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 DCLRE1BQ9H816 532 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 LIN28AQ9H9Z2 209 aaKnown RBP7.96□□□□□ -1.14
FXR1-203ENST00000445140 MAN2C1Q9NTJ4 1040 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 MED17Q9NVC6 651 aa7.96□□□□□ -1.14
FXR1-203ENST00000445140 TUBA8Q9NY65 449 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms