RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ZNF550Q7Z398 422 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 SLC22A16Q86VW1 577 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 LSRQ86X29 649 aaPredicted RBP15.62■□□□□ 0.09
LIME1-202ENST00000444951 GRAMD2AQ8IUY3 354 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 ZNF440Q8IYI8 595 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 CADM2Q8N3J6 435 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 OR4D11Q8NGI4 311 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 GPR119Q8TDV5 335 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 FAR1Q8WVX9 515 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 PYURFQ96I23 114 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 DEFB127Q9H1M4 99 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 HHATLQ9HCP6 504 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 EXOSC3Q9NQT5 275 aaKnown RBP15.62■□□□□ 0.09
LIME1-202ENST00000444951 CTPS2Q9NRF8 586 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 OSGIN2Q9Y236 505 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 RPH3AQ9Y2J0 694 aaPredicted RBP15.62■□□□□ 0.09
LIME1-202ENST00000444951 IGLV3-32A0A0A0MS00 114 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 TCRBV5S2A0A599 114 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 LRRTM2O43300 516 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 GLSO94925 669 aaPredicted RBP15.61■□□□□ 0.09
LIME1-202ENST00000444951 C8BP07358 591 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 PGCP20142 388 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 SLC6A8P48029 635 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 IDH2P48735 452 aaKnown RBP15.61■□□□□ 0.09
LIME1-202ENST00000444951 ALDH6A1Q02252 535 aaKnown RBP15.61■□□□□ 0.09
LIME1-202ENST00000444951 EPS8Q12929 822 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 QPRTQ15274 297 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 NRF1Q16656 503 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 MTX3Q5HYI7 312 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 POMZP3Q6PJE2 187 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 FAM180AQ6UWF9 173 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 YRDCQ86U90 279 aaKnown RBP15.61■□□□□ 0.09
LIME1-202ENST00000444951 RANBP3LQ86VV4 465 aaPredicted RBP15.61■□□□□ 0.09
LIME1-202ENST00000444951 OR6T1Q8NGN1 323 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 OR5M1Q8NGP8 315 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 OR14L1PQ8NHC6 308 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 RNF217Q8TC41 542 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 C1GALT1C1Q96EU7 318 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 SLC47A1Q96FL8 570 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 RSRC1Q96IZ7 334 aaKnown RBP15.61■□□□□ 0.09
LIME1-202ENST00000444951 ZNF703Q9H7S9 590 aaPredicted RBP15.61■□□□□ 0.09
LIME1-202ENST00000444951 OLAHQ9NV23 265 aa15.61■□□□□ 0.09
LIME1-202ENST00000444951 CPSF4LA6NMK7 179 aaKnown RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 hCG_2039718K7EN88 272 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 UQCRBP14927 111 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 ACAA2P42765 397 aaKnown RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 YAP1P46937 504 aaKnown RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 ZNF136P52737 540 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 SUMO3P55854 103 aaPredicted RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 DSCR4P56555 118 aaPredicted RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 COPZ1P61923 177 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 KPNB1Q14974 876 aaKnown RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 NPTX1Q15818 432 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 WIPI1Q5MNZ9 446 aaPredicted RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 RPUSD3Q6P087 351 aaKnown RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 OR52E4Q8NGH9 312 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 GEMIN6Q8WXD5 167 aaKnown RBP15.6■□□□□ 0.09
LIME1-202ENST00000444951 ZNF524Q96C55 264 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 MCHR1Q99705 422 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 SLX1AQ9BQ83 275 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 EXO5Q9H790 373 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 MED17Q9NVC6 651 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 TAS2R10Q9NYW0 307 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 AURKCQ9UQB9 309 aa15.6■□□□□ 0.09
LIME1-202ENST00000444951 NCKAP5O14513 1909 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 AQP12BA6NM10 295 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 NPIPA5E9PKD4 350 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 CRYABP02511 175 aaKnown RBP15.59■□□□□ 0.09
LIME1-202ENST00000444951 MT-ND1P03886 318 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 IFNW1P05000 195 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 EDN3P14138 238 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 HTR2AP28223 471 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 CCNIQ14094 377 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 SLC10A1Q14973 349 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 INAQ16352 499 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 RAET1LQ5VY80 246 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 ZNF324BQ6AW86 544 aaPredicted RBP15.59■□□□□ 0.09
LIME1-202ENST00000444951 PLEKHM3Q6ZWE6 761 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 AQP12AQ8IXF9 295 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 FAM109AQ8N4B1 249 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 FAM83FQ8NEG4 500 aaPredicted RBP15.59■□□□□ 0.09
LIME1-202ENST00000444951 RELTQ969Z4 430 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 NPAS1Q99742 590 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 UGT2B28Q9BY64 529 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 AMBRA1Q9C0C7 1298 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 UBQLN3Q9H347 655 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 RPS6KB2Q9UBS0 482 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 NPIPA1Q9UND3 350 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 MYO7BQ6PIF6 2116 aa15.59■□□□□ 0.09
LIME1-202ENST00000444951 DHRS12A0PJE2 317 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 ZIC3O60481 467 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 TPST2O60704 377 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 ZG16O60844 167 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 WISP2O76076 250 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 CCNA2P20248 432 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 SRD5A2P31213 254 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 TDGF1P3P51864 188 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 SESN3P58005 492 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 CHRNB3Q05901 458 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 FOXF1Q12946 379 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms