RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ENTPD1P49961 510 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 DCDP81605 110 aaKnown RBP14.4□□□□□ -0.1
SNX13-204ENST00000444712 NKAIN1Q4KMZ8 207 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 PSD4Q8NDX1 1056 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 OR13C2Q8NGS9 318 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 RPL3LQ92901 407 aaKnown RBP14.4□□□□□ -0.1
SNX13-204ENST00000444712 SGTBQ96EQ0 304 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 OPALINQ96PE5 141 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 IFT27Q9BW83 186 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 WWTR1Q9GZV5 400 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 PALMDQ9NP74 551 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 FSCN3Q9NQT6 498 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 CMC2Q9NRP2 79 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 CTSFQ9UBX1 484 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 OSGIN1Q9UJX0 560 aa14.4□□□□□ -0.1
SNX13-204ENST00000444712 ADAM11O75078 769 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 PTP4A3O75365 173 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 REM1O75628 298 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 INHBBP09529 407 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 PNLIPRP2P54317 469 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 WNT4P56705 351 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 CRYZQ08257 329 aaKnown RBP14.39□□□□□ -0.11
SNX13-204ENST00000444712 PLCXD2Q0VAA5 305 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 TRA2AQ13595 282 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNX13-204ENST00000444712 TRIM61Q5EBN2 209 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 ARHGAP11AQ6P4F7 1023 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 PPP1R3BQ86XI6 285 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 C9orf40Q8IXQ3 194 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 PRSS58Q8IYP2 241 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 AMER2Q8N7J2 671 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 GFM1Q96RP9 751 aaKnown RBP14.39□□□□□ -0.11
SNX13-204ENST00000444712 JAM3Q9BX67 310 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 C12orf10Q9HB07 376 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 HMG20AQ9NP66 347 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 SEC14L4Q9UDX3 406 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 EXOGQ9Y2C4 368 aaKnown RBP14.39□□□□□ -0.11
SNX13-204ENST00000444712 A3GALT2U3KPV4 340 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 RIIAD1A6NNX1 92 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 IFNGP01579 166 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 HEXBP07686 556 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 ZNF3P17036 446 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 PTNP21246 168 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 PSMA1P25786 263 aaKnown RBP14.39□□□□□ -0.11
SNX13-204ENST00000444712 GAS1P54826 345 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 MLLT10P55197 1068 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 FXYD6P3P58550 94 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 SKP2Q13309 424 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 METTL21AQ8WXB1 218 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 TP53INP1Q96A56 240 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 C3orf49Q96BT1 292 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 WDR12Q9GZL7 423 aaKnown RBP14.39□□□□□ -0.11
SNX13-204ENST00000444712 LAT2Q9GZY6 243 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 CCDC59Q9P031 241 aaKnown RBP14.39□□□□□ -0.11
SNX13-204ENST00000444712 CLEC2DQ9UHP7 191 aa14.39□□□□□ -0.11
SNX13-204ENST00000444712 HEATR5AQ86XA9 2040 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 SDK1Q7Z5N4 2213 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 ELOA3DA6NLF2 546 aaPredicted RBP14.38□□□□□ -0.11
SNX13-204ENST00000444712 TSPAN2O60636 221 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 HK1P19367 917 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 PAICSP22234 425 aaKnown RBP14.38□□□□□ -0.11
SNX13-204ENST00000444712 NR0B1P51843 470 aaKnown RBP14.38□□□□□ -0.11
SNX13-204ENST00000444712 EFNA3P52797 238 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 FOXK2Q01167 660 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 ZNF846Q147U1 533 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 ELOA3BQ3SY89 546 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 LAPTM4BQ86VI4 370 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 CPOQ8IVL8 374 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 TMCO5AQ8N6Q1 288 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 DTWD2Q8NBA8 298 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 ELOA3Q8NG57 546 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 LMF1Q96S06 567 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 ADOQ96SZ5 270 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 TMEM43Q9BTV4 400 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 HINT3Q9NQE9 182 aaKnown RBP14.38□□□□□ -0.11
SNX13-204ENST00000444712 SLC22A11Q9NSA0 550 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 NDUFB11Q9NX14 153 aa14.38□□□□□ -0.11
SNX13-204ENST00000444712 LOC100506127A0A0U1RQW1 187 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 SLC22A31A6NKX4 558 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 PRR23D1E9PI22 279 aaPredicted RBP14.37□□□□□ -0.11
SNX13-204ENST00000444712 EIF4E2O60573 245 aaKnown RBP14.37□□□□□ -0.11
SNX13-204ENST00000444712 RFPL3O75679 317 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 NDUFB2O95178 105 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 PRR23D2P0DMB1 279 aaPredicted RBP14.37□□□□□ -0.11
SNX13-204ENST00000444712 ATP6V1E1P36543 226 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 ETV5P41161 510 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 ETV1P50549 477 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 NRG3P56975 720 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 IL11RAQ14626 422 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 OVCH1Q7RTY7 1134 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 ATCAYQ86WG3 371 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 ZNF441Q8N8Z8 693 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 CHCHD6Q9BRQ6 235 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 OR51E2Q9H255 320 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 ZBTB20Q9HC78 741 aaPredicted RBP14.37□□□□□ -0.11
SNX13-204ENST00000444712 IL20RAQ9UHF4 553 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 TRAV27A0A087WT01 109 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 SAGE2PA6NJ88 616 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 IDSB3KWA1 339 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 CLDN25C9JDP6 229 aa14.37□□□□□ -0.11
SNX13-204ENST00000444712 ALOX12BO75342 701 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms