RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 CTDNEP1O95476 244 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 RAF1P04049 648 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CT45A8P0DMV1 189 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CT45A9P0DMV2 189 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 EIF1P41567 113 aaKnown RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 EFNB2P52799 333 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 IRF4Q15306 451 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 INPP5JQ15735 1006 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 ISXQ2M1V0 245 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 PRTGQ2VWP7 1150 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CT45A2Q5DJT8 189 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ANKRD54Q6NXT1 300 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 PAQR6Q6TCH4 344 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CERS6Q6ZMG9 384 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 MON1BQ7L1V2 547 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CTU1Q7Z7A3 348 aaKnown RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 RIMKLAQ8IXN7 391 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 FITM2Q8N6M3 262 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 NOA1Q8NC60 698 aaKnown RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 ZNF738Q8NE65 137 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 TFGQ92734 400 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 NSL1Q96IY1 281 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 NOL4LQ96MY1 436 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 TSSK2Q96PF2 358 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 RBBP8Q99708 897 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 NEURL2Q9BR09 285 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 TMEM38AQ9H6F2 299 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 SFXN1Q9H9B4 322 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 MLXIPLQ9NP71 852 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 KLHL21Q9UJP4 597 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CDC42EP3Q9UKI2 254 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 NEXMIFQ5QGS0 1516 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 MST1RQ04912 1400 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ERBINQ96RT1 1412 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 MYO5CQ9NQX4 1742 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 A0A1B0GVI7 797 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 LRRC30A6NM36 301 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 LMO7DNF2Z398 122 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 VCYO14598 125 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 UGT1A9O60656 530 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 RAMP3O60896 148 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 SERPINB7O75635 380 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 APOC1P02654 83 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 FGGP02679 453 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ESR1P03372 595 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 VTNP04004 478 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 RFPL3SP0C7P2 107 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CDH1P12830 882 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 TACR1P25103 407 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 PRDX3P30048 256 aaKnown RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 SRD5A2P31213 254 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 SOX2P48431 317 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CSNK1A1P48729 337 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 HOXA1P49639 335 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 JAG1P78504 1218 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 KLRC3Q07444 240 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ODF4Q2M2E3 257 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 LINGO2Q7L985 606 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 C12orf76Q8N812 135 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 DACT3Q96B18 629 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 TMEM209Q96SK2 561 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CDCA3Q99618 268 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 ECSITQ9BQ95 431 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ZNF2Q9BSG1 426 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 TMEM109Q9BVC6 243 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 LAT2Q9GZY6 243 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 UGT1A7Q9HAW7 530 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 GPATCH2LQ9NWQ4 482 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 SLC17A6Q9P2U8 582 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 KLHDC2Q9Y2U9 406 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 TMED7Q9Y3B3 224 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 RREB1Q92766 1687 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ITSN2Q9NZM3 1697 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ADGRA3Q8IWK6 1321 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 PDHXO00330 501 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 OR7A17O14581 309 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 SURF4O15260 269 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 TM9SF1O15321 606 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 TMEM50AO95807 157 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CD59P13987 128 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 IVDP26440 423 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 GABRR2P28476 465 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 DUSP1P28562 367 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 CNR2P34972 360 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 VLDLRP98155 873 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ORC2Q13416 577 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 TPBGQ13641 420 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 KIR3DS1Q14943 382 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 EXOSC7Q15024 291 aaKnown RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 ZIC1Q15915 447 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 ZNF77Q15935 545 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 KCTD19Q17RG1 926 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 NKPD1Q17RQ9 610 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 PLEKHN1Q494U1 663 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 GCSAMLQ5JQS6 135 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 WDR25Q64LD2 544 aaPredicted RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 DOK6Q6PKX4 331 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 BTNL3Q6UXE8 466 aa3.56□□□□□ -1.84
UBR3-206ENST00000444475 RBMS3Q6XE24 437 aaKnown RBP3.56□□□□□ -1.84
UBR3-206ENST00000444475 ASB18Q6ZVZ8 466 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms